RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 SV2BQ7L1I2 683 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 HSCBQ8IWL3 235 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 CD302Q8IX05 232 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 FLCNQ8NFG4 579 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 ZNF461Q8TAF7 563 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 DDX12PQ92771 950 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 HVCN1Q96D96 273 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 TSPAN18Q96SJ8 248 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 SEL1LQ9UBV2 794 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 FBXL5Q9UKA1 691 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 CDH7Q9ULB5 785 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 PCDHB8Q9UN66 801 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 NUMBLQ9Y6R0 609 aa15.17■□□□□ 0.02
USP4-206ENST00000461553 A0A0B4J269 797 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 LACTBL1A8MY62 500 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 FAM189A1O60320 539 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 CFHP08603 1231 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 CPB1P15086 417 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 GAP43P17677 238 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 YWHAHQ04917 246 aaPredicted RBP15.16■□□□□ 0.02
USP4-206ENST00000461553 TCF15Q12870 199 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 STK38Q15208 465 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 TPGS2Q68CL5 300 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 CWF19L1Q69YN2 538 aaKnown RBP15.16■□□□□ 0.02
USP4-206ENST00000461553 SLFN12LQ6IEE8 588 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 SLC39A4Q6P5W5 647 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 MTSS1LQ765P7 747 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 SIX5Q8N196 739 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 TMEM105Q8N8V8 129 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 BEST2Q8NFU1 509 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 FAM212AQ96EL1 285 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 IRF2BPLQ9H1B7 796 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 ST6GALNAC4Q9H4F1 302 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 MRPL44Q9H9J2 332 aaKnown RBP15.16■□□□□ 0.02
USP4-206ENST00000461553 CYP4F11Q9HBI6 524 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 KCNH3Q9ULD8 1083 aa15.16■□□□□ 0.02
USP4-206ENST00000461553 ARHGEF37A1IGU5 675 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 ANHXE9PGG2 379 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 GALR2O43603 387 aaPredicted RBP15.15■□□□□ 0.02
USP4-206ENST00000461553 ABLIM3O94929 683 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 HSP90AA1P07900 732 aaKnown RBP15.15■□□□□ 0.02
USP4-206ENST00000461553 ATF2P15336 505 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 NASPP49321 788 aaPredicted RBP15.15■□□□□ 0.02
USP4-206ENST00000461553 MRE11P49959 708 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 CLCN5P51795 746 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 MRPL58Q14197 206 aaKnown RBP15.15■□□□□ 0.02
USP4-206ENST00000461553 TMEM132DQ14C87 1099 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 SLC39A14Q15043 492 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 ZC2HC1CQ53FD0 456 aaPredicted RBP15.15■□□□□ 0.02
USP4-206ENST00000461553 ADALQ6DHV7 355 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 USP37Q86T82 979 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 ALYREFQ86V81 257 aaKnown RBP15.15■□□□□ 0.02
USP4-206ENST00000461553 ELMOD1Q8N336 334 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 FGF13Q92913 245 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 HCFC1R1Q9NWW0 138 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 WNT16Q9UBV4 365 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 CPSF3Q9UKF6 684 aaKnown RBP15.15■□□□□ 0.02
USP4-206ENST00000461553 EXOC7Q9UPT5 735 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 MRPS23Q9Y3D9 190 aaKnown RBP15.15■□□□□ 0.02
USP4-206ENST00000461553 INSL5Q9Y5Q6 135 aa15.15■□□□□ 0.02
USP4-206ENST00000461553 MYO15AQ9UKN7 3530 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 MYMKA6NI61 221 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 M0QZQ0 153 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 TBC1D4O60343 1298 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 GCNT3O95395 438 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 NFICP08651 508 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 IDEP14735 1019 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 AOC1P19801 751 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 ACOT2P49753 483 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 GUCY2FP51841 1108 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 ZBTB6Q15916 424 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 JADE1Q6IE81 842 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 DSTYKQ6XUX3 929 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 NPAS3Q8IXF0 933 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 TCEAL8Q8IYN2 117 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 TMEM130Q8N3G9 435 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 SLC44A3Q8N4M1 653 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 ITFG1Q8TB96 612 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 ING5Q8WYH8 240 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 POMGNT1Q8WZA1 660 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 SNX21Q969T3 373 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 ZNF396Q96N95 335 aaPredicted RBP15.14■□□□□ 0.01
USP4-206ENST00000461553 OXCT2Q9BYC2 517 aaPredicted RBP15.14■□□□□ 0.01
USP4-206ENST00000461553 DNMT3BQ9UBC3 853 aaKnown RBP15.14■□□□□ 0.01
USP4-206ENST00000461553 AFF4Q9UHB7 1163 aaKnown RBP15.14■□□□□ 0.01
USP4-206ENST00000461553 AGO2Q9UKV8 859 aaKnown RBP15.14■□□□□ 0.01
USP4-206ENST00000461553 CA14Q9ULX7 337 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 DERAQ9Y315 318 aa15.14■□□□□ 0.01
USP4-206ENST00000461553 NUP210Q8TEM1 1887 aaPredicted RBP15.14■□□□□ 0.01
USP4-206ENST00000461553 TISP43B9A030 160 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 ANKRD63C9JTQ0 380 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 PPP1R37O75864 691 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 ADRB2P07550 413 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 RHOP08100 348 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 ODC1P11926 461 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 AARSP49588 968 aaKnown RBP eCLIP15.13■□□□□ 0.01
USP4-206ENST00000461553 ADCY1Q08828 1119 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 ALCAMQ13740 583 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 POSTNQ15063 836 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 L1TD1Q5T7N2 865 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms