RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CAMK1Q14012 370 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 GRIN2CQ14957 1233 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 IQCB1Q15051 598 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 CDKAL1Q5VV42 579 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 TDRD10Q5VZ19 366 aaKnown RBP12.18□□□□□ -0.46
SSBP1-202ENST00000461433 SV2AQ7L0J3 742 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 TRIM59Q8IWR1 403 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 DHX40Q8IX18 779 aaKnown RBP12.18□□□□□ -0.46
SSBP1-202ENST00000461433 HASPINQ8TF76 798 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 ANKRD36BP1Q96IX9 119 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 CNOT6LQ96LI5 555 aaKnown RBP12.18□□□□□ -0.46
SSBP1-202ENST00000461433 GPR62Q9BZJ7 368 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 METTL14Q9HCE5 456 aaKnown RBP12.18□□□□□ -0.46
SSBP1-202ENST00000461433 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
SSBP1-202ENST00000461433 FANCLQ9NW38 375 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 ADAM28Q9UKQ2 775 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 ITGA11Q9UKX5 1188 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 CARNS1A5YM72 827 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 SPTLC1O15269 473 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 GRM6O15303 877 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 VNN1O95497 513 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 TNNC2P02585 160 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 POLR2BP30876 1174 aaKnown RBP12.17□□□□□ -0.46
SSBP1-202ENST00000461433 PPM1AP35813 382 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 GCLMP48507 274 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 ZNF165P49910 485 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 AP3M2P53677 418 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 MYL5Q02045 173 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 GPM6BQ13491 265 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 ZACNQ401N2 412 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 CCDC40Q4G0X9 1142 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 HSP90AA4PQ58FG1 418 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 LRSAM1Q6UWE0 723 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 TAS1R1Q7RTX1 841 aa12.17□□□□□ -0.46
SSBP1-202ENST00000461433 DDX53Q86TM3 631 aaKnown RBP12.17□□□□□ -0.46
SSBP1-202ENST00000461433 C11orf84Q9BUA3 381 aaPredicted RBP12.17□□□□□ -0.46
SSBP1-202ENST00000461433 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
SSBP1-202ENST00000461433 TADA2AO75478 443 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 BRCC3P46736 316 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 AARSP49588 968 aaKnown RBP eCLIP12.16□□□□□ -0.46
SSBP1-202ENST00000461433 LILRA4P59901 499 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 ZNF445P59923 1031 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 TPD52L1Q16890 204 aaPredicted RBP12.16□□□□□ -0.46
SSBP1-202ENST00000461433 CBWD6Q4V339 395 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 TIGD5Q53EQ6 642 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 CBWD3Q5JTY5 395 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 CBWD5Q5RIA9 395 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 ZNF697Q5TEC3 545 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 FUT10Q6P4F1 479 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 USP37Q86T82 979 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 AOPEPQ8N6M6 819 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 GDPD5Q8WTR4 605 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 TMEM169Q96HH4 297 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 AGAP1Q9UPQ3 857 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 LZTS1Q9Y250 596 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 MYO9BQ13459 2157 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 I3L4J1 428 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 LRRN2O75325 713 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 ZNF18P17022 549 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 GTF2H1P32780 548 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 ERVFC1P60507 584 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 RBP5P82980 135 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 KRT17Q04695 432 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 UBE3AQ05086 875 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 DCAF17Q5H9S7 520 aaPredicted RBP12.16□□□□□ -0.46
SSBP1-202ENST00000461433 Q7L0L9 218 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 POF1BQ8WVV4 589 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 FAM161BQ96MY7 647 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 XYLT2Q9H1B5 865 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 PRDM12Q9H4Q4 367 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 CBX8Q9HC52 389 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 TMEM8AQ9HCN3 771 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 CHST7Q9NS84 486 aa12.16□□□□□ -0.46
SSBP1-202ENST00000461433 TSC2P49815 1807 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 KCNJ18B7U540 433 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 M0QZQ0 153 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 KRT19P08727 400 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 MYL6P60660 151 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 KCNH2Q12809 1159 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 KCNJ12Q14500 433 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 TCP11X2Q5H9J9 407 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 TCERG1LQ5VWI1 586 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 KRT39Q6A163 491 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 LRRC52Q8N7C0 313 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 TAS1R2Q8TE23 839 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 SUSD3Q96L08 255 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 MMRN2Q9H8L6 949 aa12.15□□□□□ -0.46
SSBP1-202ENST00000461433 SF3B1O75533 1304 aaKnown RBP eCLIP12.14□□□□□ -0.471e-9■■■□□ 18.4
SSBP1-202ENST00000461433 KPNA7A9QM74 516 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 FSCN2O14926 492 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 PMM2O15305 246 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 STX10O60499 249 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 SLC34A2O95436 690 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 CAVIN2O95810 425 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 SOD2P04179 222 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 FGFR3P22607 806 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 EEF1GP26641 437 aaKnown RBP12.14□□□□□ -0.47
SSBP1-202ENST00000461433 IRS1P35568 1242 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 FMO5P49326 533 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms