RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 HDCP19113 662 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 EN2P19622 333 aaPredicted RBP3.84□□□□□ -1.79
VCL-203ENST00000461383 ABCB4P21439 1286 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 PPM1FP49593 454 aaPredicted RBP3.84□□□□□ -1.79
VCL-203ENST00000461383 CASP5P51878 434 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 MXRA7P84157 204 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 HGFACQ04756 655 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 ZNF543Q08ER8 600 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 RIN1Q13671 783 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 NFYCQ13952 458 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 DAG1Q14118 895 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 PDCD2Q16342 344 aaPredicted RBP3.84□□□□□ -1.79
VCL-203ENST00000461383 CCDC93Q567U6 631 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 MFSD14BQ5SR56 506 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 TCERG1LQ5VWI1 586 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 IZUMO3Q5VZ72 239 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 ARHGEF18Q6ZSZ5 1173 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 UBE3BQ7Z3V4 1068 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 FAM90A1Q86YD7 464 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 DCBLD1Q8N8Z6 715 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 ANKRD42Q8N9B4 389 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 LINC01356Q8N9X3 169 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 KBTBD7Q8WVZ9 684 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 DACT3Q96B18 629 aaPredicted RBP3.84□□□□□ -1.79
VCL-203ENST00000461383 CEP95Q96GE4 821 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 MYOCQ99972 504 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 CRB3Q9BUF7 120 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.84□□□□□ -1.79
VCL-203ENST00000461383 TRMT13Q9NUP7 481 aaKnown RBP3.84□□□□□ -1.79
VCL-203ENST00000461383 SLC4A7Q9Y6M7 1214 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 CXorf49A8MYA2 514 aaPredicted RBP3.83□□□□□ -1.8
VCL-203ENST00000461383 MYO1FO00160 1098 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 NCK2O43639 380 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 TRIM13O60858 407 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 NBNO60934 754 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 POMCP01189 267 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 GJB1P08034 283 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 GNAT2P19087 354 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 TECP42680 631 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 KCNC1P48547 511 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 CLRN1P58418 232 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 PSMC1P62191 440 aaKnown RBP3.83□□□□□ -1.8
VCL-203ENST00000461383 TNFAIP2Q03169 654 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 SLC13A2Q13183 592 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 MRPL49Q13405 166 aaKnown RBP3.83□□□□□ -1.8
VCL-203ENST00000461383 RAB32Q13637 225 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 C4orf46Q504U0 113 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 C3orf38Q5JPI3 329 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 DACT2Q5SW24 774 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 OTUD7BQ6GQQ9 843 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 SEM1Q6ZVN7 128 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 SESTD1Q86VW0 696 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 TXLNBQ8N3L3 684 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 MPP5Q8N3R9 675 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 IL17RDQ8NFM7 739 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 PPM1EQ8WY54 764 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 CCT6BQ92526 530 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 KIAA1191Q96A73 305 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 MRGPRX1Q96LB2 322 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 SCLT1Q96NL6 688 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 LRRC37BQ96QE4 947 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 DPYSL5Q9BPU6 564 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 HERPUD2Q9BSE4 406 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 BRIP1Q9BX63 1249 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 SPON1Q9HCB6 807 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 SERHLQ9NQF3 203 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 USP40Q9NVE5 1235 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 CDC23Q9UJX2 597 aa3.83□□□□□ -1.8
VCL-203ENST00000461383 ATRNL1Q5VV63 1379 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 hCG_1642624A0A1W2PR95 340 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 ZNF785A8K8V0 405 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 PRR5-ARHGAP8B1AHC4 643 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 BTN3A1O00481 513 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 PJA2O43164 708 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 HOXA3O43365 443 aaPredicted RBP3.82□□□□□ -1.8
VCL-203ENST00000461383 HAUS5O94927 633 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 MATN4O95460 622 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 AMHP03971 560 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 SBK3P0C264 359 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 RARBP10826 455 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 CR2P20023 1033 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 PPM1AP35813 382 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 SLURP1P55000 103 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 RPS16P62249 146 aaKnown RBP3.82□□□□□ -1.8
VCL-203ENST00000461383 RAPGEF1Q13905 1077 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 STARD3Q14849 445 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 ELF2Q15723 593 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 FAM214AQ32MH5 1076 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 ARL13BQ3SXY8 428 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 INO80DQ53TQ3 878 aaPredicted RBP3.82□□□□□ -1.8
VCL-203ENST00000461383 DGKKQ5KSL6 1271 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 EMC10Q5UCC4 262 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 LMBRD2Q68DH5 695 aaPredicted RBP3.82□□□□□ -1.8
VCL-203ENST00000461383 HIBCHQ6NVY1 386 aaPredicted RBP3.82□□□□□ -1.8
VCL-203ENST00000461383 ERAP2Q6P179 960 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 FAM111BQ6SJ93 734 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 ZNF365Q70YC5 407 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 ADGRE4PQ86SQ3 457 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 FAM83AQ86UY5 434 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 XYLT1Q86Y38 959 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms