RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 FGFR1OPO95684 399 aaKnown RBP24.28■■□□□ 1.48
C9orf3-209ENST00000460573 TNNC2P02585 160 aa24.28■■□□□ 1.48
C9orf3-209ENST00000460573 DLATP10515 647 aaKnown RBP24.28■■□□□ 1.48
C9orf3-209ENST00000460573 KRT13P13646 458 aa24.28■■□□□ 1.48
C9orf3-209ENST00000460573 TNNI1P19237 187 aa24.28■■□□□ 1.48
C9orf3-209ENST00000460573 MCCD1P59942 119 aaPredicted RBP24.28■■□□□ 1.48
C9orf3-209ENST00000460573 FILIP1Q7Z7B0 1213 aa24.28■■□□□ 1.48
C9orf3-209ENST00000460573 BCL7CQ8WUZ0 217 aaPredicted RBP24.28■■□□□ 1.48
C9orf3-209ENST00000460573 CCDC127Q96BQ5 260 aa24.28■■□□□ 1.48
C9orf3-209ENST00000460573 DUSP9Q99956 384 aaKnown RBP24.28■■□□□ 1.48
C9orf3-209ENST00000460573 ANO10Q9NW15 660 aa24.28■■□□□ 1.48
C9orf3-209ENST00000460573 BRWD1Q9NSI6 2320 aa24.28■■□□□ 1.48
C9orf3-209ENST00000460573 IKBKBO14920 756 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 KIF4AO95239 1232 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 STX17P56962 302 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 CLDN10P78369 228 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 NFKBIBQ15653 356 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 STX1AQ16623 288 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 LEXMQ3ZCV2 418 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 FUT10Q6P4F1 479 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 CSGALNACT2Q8N6G5 542 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 IGFLR1Q9H665 355 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 NGRNQ9NPE2 291 aaKnown RBP24.27■■□□□ 1.48
C9orf3-209ENST00000460573 TLR9Q9NR96 1032 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 CACNG4Q9UBN1 327 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 ITGA11Q9UKX5 1188 aa24.27■■□□□ 1.48
C9orf3-209ENST00000460573 SF3B1O75533 1304 aaKnown RBP eCLIP24.27■■□□□ 1.483e-6■■■■■ 136.2
C9orf3-209ENST00000460573 ANO9A1A5B4 782 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 H3BQ06 376 aaPredicted RBP24.26■■□□□ 1.47
C9orf3-209ENST00000460573 PIRO00625 290 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 EFEMP2O95967 443 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 SOD2P04179 222 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 VAMP7P51809 220 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 PUS10Q3MIT2 529 aaKnown RBP24.26■■□□□ 1.47
C9orf3-209ENST00000460573 C9orf57Q5W0N0 161 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 PTCRAQ6ISU1 281 aaPredicted RBP24.26■■□□□ 1.47
C9orf3-209ENST00000460573 RNF168Q8IYW5 571 aaPredicted RBP24.26■■□□□ 1.47
C9orf3-209ENST00000460573 VPS52Q8N1B4 723 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 RABGGTAQ92696 567 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 PABPC5Q96DU9 382 aaKnown RBP24.26■■□□□ 1.47
C9orf3-209ENST00000460573 METTL14Q9HCE5 456 aaKnown RBP24.26■■□□□ 1.47
C9orf3-209ENST00000460573 SSX2IPQ9Y2D8 614 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 NUB1Q9Y5A7 615 aa24.26■■□□□ 1.47
C9orf3-209ENST00000460573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.25■■□□□ 1.47
C9orf3-209ENST00000460573 GNA14O95837 355 aa24.25■■□□□ 1.47
C9orf3-209ENST00000460573 SSTR3P32745 418 aaPredicted RBP24.25■■□□□ 1.47
C9orf3-209ENST00000460573 BFSP1Q12934 665 aa24.25■■□□□ 1.47
C9orf3-209ENST00000460573 CAMK1Q14012 370 aa24.25■■□□□ 1.47
C9orf3-209ENST00000460573 GPR65Q8IYL9 337 aa24.25■■□□□ 1.47
C9orf3-209ENST00000460573 MICAL1Q8TDZ2 1067 aa24.25■■□□□ 1.47
C9orf3-209ENST00000460573 HERC2P3Q9BVR0 1158 aa24.25■■□□□ 1.47
C9orf3-209ENST00000460573 MTMR12Q9C0I1 747 aa24.25■■□□□ 1.47
C9orf3-209ENST00000460573 GZF1Q9H116 711 aaPredicted RBP24.25■■□□□ 1.47
C9orf3-209ENST00000460573 R3HCC1Q9Y3T6 440 aaKnown RBP24.25■■□□□ 1.47
C9orf3-209ENST00000460573 REV3LO60673 3130 aa24.25■■□□□ 1.47
C9orf3-209ENST00000460573 NCOR1O75376 2440 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 PLXNA4Q9HCM2 1894 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 LRRIQ3A6PVS8 624 aaPredicted RBP24.24■■□□□ 1.47
C9orf3-209ENST00000460573 F8W810 466 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 DNAJB1P25685 340 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 PNPLA4P41247 253 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 GUCY2FP51841 1108 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 RBP5P82980 135 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 USP41Q3LFD5 358 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 CD300LGQ6UXG3 332 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 TMC7Q7Z402 723 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 FRMD5Q7Z6J6 570 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 C1orf127Q8N9H9 656 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 C3orf58Q8NDZ4 430 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 OR5B17Q8NGF7 314 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 PLEKHO2Q8TD55 490 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 EEF2KMTQ96G04 330 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 BORCS6Q96GS4 357 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 ZNF560Q96MR9 790 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 POP1Q99575 1024 aaKnown RBP24.24■■□□□ 1.47
C9orf3-209ENST00000460573 GPR62Q9BZJ7 368 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 ZBP1Q9H171 429 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 MYO7AQ13402 2215 aa24.24■■□□□ 1.47
C9orf3-209ENST00000460573 FSCN2O14926 492 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 STX10O60499 249 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 CTSAP10619 480 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 LMBRD2Q68DH5 695 aaPredicted RBP24.23■■□□□ 1.47
C9orf3-209ENST00000460573 TRAPPC11Q7Z392 1133 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 LRRC52Q8N7C0 313 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 HASPINQ8TF76 798 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 TCF25Q9BQ70 676 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 VN1R3Q9BXE9 311 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 SRRTQ9BXP5 876 aaKnown RBP24.23■■□□□ 1.47
C9orf3-209ENST00000460573 ENTPD7Q9NQZ7 604 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 CHST7Q9NS84 486 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 ARMCX3Q9UH62 379 aaPredicted RBP24.23■■□□□ 1.47
C9orf3-209ENST00000460573 IRAK3Q9Y616 596 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 PTPRJQ12913 1337 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 ATG2AQ2TAZ0 1938 aa24.23■■□□□ 1.47
C9orf3-209ENST00000460573 ITGB3P05106 788 aa24.22■■□□□ 1.47
C9orf3-209ENST00000460573 TAF6P49848 677 aa24.22■■□□□ 1.47
C9orf3-209ENST00000460573 ERVFC1P60507 584 aa24.22■■□□□ 1.47
C9orf3-209ENST00000460573 TYRO3Q06418 890 aa24.22■■□□□ 1.47
C9orf3-209ENST00000460573 SMC1AQ14683 1233 aaKnown RBP24.22■■□□□ 1.47
C9orf3-209ENST00000460573 TPD52L1Q16890 204 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms