RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 PHACTR2O75167 634 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 PPFIA4O75335 1185 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 KRT5P13647 590 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 CHRNB2P17787 502 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 CTNNA2P26232 953 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 ADORA2AP29274 412 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 SLC1A1P43005 524 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 PTENP60484 403 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 CENPCQ03188 943 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 GRB14Q14449 540 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 LIN9Q5TKA1 542 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 NT5DC4Q86YG4 428 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 TTC39CQ8N584 583 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 METTL13Q8N6R0 699 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 RNF149Q8NC42 400 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 DIS3LQ8TF46 1054 aaKnown RBP15.09■□□□□ 0.01
ERCC3-205ENST00000460485 MAIP1Q8WWC4 291 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 DDX1Q92499 740 aaKnown RBP15.09■□□□□ 0.01
ERCC3-205ENST00000460485 LRRC1Q9BTT6 524 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 FAM129AQ9BZQ8 928 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 TOPORSQ9NS56 1045 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-205ENST00000460485 SCINQ9Y6U3 715 aa15.09■□□□□ 0.01
ERCC3-205ENST00000460485 SLC15A5A6NIM6 579 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 ZEB2O60315 1214 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 FAM189A1O60320 539 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 SORBS3O60504 671 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 B4GALT4O60513 344 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 C22orf31O95567 290 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 LSM8O95777 96 aaKnown RBP15.08■□□□□ 0
ERCC3-205ENST00000460485 TNNC2P02585 160 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 LGALS2P05162 132 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 MCF2P10911 925 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 NOP14P78316 857 aaKnown RBP15.08■□□□□ 0
ERCC3-205ENST00000460485 NCOA4Q13772 614 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 DHX34Q14147 1143 aaKnown RBP15.08■□□□□ 0
ERCC3-205ENST00000460485 DUOXA2Q1HG44 320 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 SGSM1Q2NKQ1 1148 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 SEL1L2Q5TEA6 688 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 ALS2CLQ60I27 953 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 EEPD1Q7L9B9 569 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 ZNF410Q86VK4 478 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 SLC47A2Q86VL8 602 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 MREGQ8N565 214 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 ZNF564Q8TBZ8 553 aaPredicted RBP15.08■□□□□ 0
ERCC3-205ENST00000460485 ZNF516Q92618 1163 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 ZNF653Q96CK0 615 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 ANKRD36BP1Q96IX9 119 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 PSMB7Q99436 277 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 ZSWIM1Q9BR11 485 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 TCHPQ9BT92 498 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.08■□□□□ 0
ERCC3-205ENST00000460485 RAB17Q9H0T7 212 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 ABHD16BQ9H3Z7 469 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 PDE11AQ9HCR9 933 aa15.08■□□□□ 0
ERCC3-205ENST00000460485 MRPL47Q9HD33 250 aaKnown RBP15.08■□□□□ 0
ERCC3-205ENST00000460485 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.08■□□□□ 0
ERCC3-205ENST00000460485 CPSF3Q9UKF6 684 aaKnown RBP15.08■□□□□ 0
ERCC3-205ENST00000460485 KRIT1O00522 736 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 DDX3YO15523 660 aaKnown RBP15.07■□□□□ 0
ERCC3-205ENST00000460485 HEXIM1O94992 359 aaKnown RBP15.07■□□□□ 0
ERCC3-205ENST00000460485 ASS1P00966 412 aaKnown RBP15.07■□□□□ 0
ERCC3-205ENST00000460485 CYP1A1P04798 512 aaPredicted RBP15.07■□□□□ 0
ERCC3-205ENST00000460485 OAS2P29728 719 aaKnown RBP15.07■□□□□ 0
ERCC3-205ENST00000460485 TNNT3P45378 269 aaPredicted RBP15.07■□□□□ 0
ERCC3-205ENST00000460485 NSFP46459 744 aaKnown RBP15.07■□□□□ 0
ERCC3-205ENST00000460485 ACOT2P49753 483 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 ATF7IP2Q5U623 682 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 IQSEC1Q6DN90 963 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 TAPT1Q6NXT6 567 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 LINC01465Q8N7H1 131 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 KAT5Q92993 513 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 ARHGEF26Q96DR7 871 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 POP1Q99575 1024 aaKnown RBP15.07■□□□□ 0
ERCC3-205ENST00000460485 ZNF518BQ9C0D4 1074 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 NIF3L1Q9GZT8 377 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 C11orf49Q9H6J7 331 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 PTPRHQ9HD43 1115 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 OSGEPQ9NPF4 335 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 RASAL2Q9UJF2 1139 aa15.07■□□□□ 0
ERCC3-205ENST00000460485 FAM187AA6NFU0 413 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 RRN3P2A6NIE6 340 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 ABLIM1O14639 778 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 OPA1O60313 960 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 VNN1O95497 513 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 MMEP08473 750 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 TMEM191BP0C7N4 346 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 UNGP13051 313 aaPredicted RBP15.06■□□□□ 0
ERCC3-205ENST00000460485 SYN1P17600 705 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 CTNNA1P35221 906 aaKnown RBP15.06■□□□□ 0
ERCC3-205ENST00000460485 ZNF132P52740 706 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
ERCC3-205ENST00000460485 PTP4A2Q12974 167 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
ERCC3-205ENST00000460485 ZNF568Q3ZCX4 644 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 DUSP28Q4G0W2 176 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 SPDYCQ5MJ68 293 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 EFCAB12Q6NXP0 572 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 PLEKHH3Q7Z736 793 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 PALB2Q86YC2 1186 aa15.06■□□□□ 0
ERCC3-205ENST00000460485 RHPN2Q8IUC4 686 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms