RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 SLC27A1Q6PCB7 646 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 PHF13Q86YI8 300 aaPredicted RBP8.62□□□□□ -1.03
SFPQ-202ENST00000460428 TMEM192Q8IY95 271 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 C1orf127Q8N9H9 656 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 SPATA4Q8NEY3 305 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 ACTRT1Q8TDG2 376 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 COG1Q8WTW3 980 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 ARHGEF26Q96DR7 871 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 TRIM11Q96F44 468 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 FAM84AQ96KN4 292 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 ARID3AQ99856 593 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 ZNF518BQ9C0D4 1074 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 THAP2Q9H0W7 228 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 ANKZF1Q9H8Y5 726 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 GTF2IRD1Q9UHL9 959 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 SIX4Q9UIU6 781 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 ITGA11Q9UKX5 1188 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 GABRQQ9UN88 632 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 COG5Q9UP83 839 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 RALGAPA2Q2PPJ7 1873 aa8.62□□□□□ -1.03
SFPQ-202ENST00000460428 UMODL1Q5DID0 1318 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CCDC151A5D8V7 595 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 MIF4GDA9UHW6 222 aaKnown RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 ZNF185O15231 689 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 BUB1BO60566 1050 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CSDE1O75534 798 aaKnown RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 LSM8O95777 96 aaKnown RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 TFRCP02786 760 aaKnown RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 PAEPP09466 180 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 KRT5P13647 590 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 HOXD10P28358 340 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 MAP2K2P36507 400 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 USP8P40818 1118 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 IRX5P78411 483 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 TFAMQ00059 246 aaKnown RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 BEX3Q00994 111 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 PRKCZQ05513 592 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 PTPN11Q06124 597 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CACNB2Q08289 660 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 KIZQ2M2Z5 673 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 ZNF699Q32M78 642 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 GLE1Q53GS7 698 aaKnown RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 SCARA3Q6AZY7 606 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 JADE1Q6IE81 842 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 FBXO38Q6PIJ6 1188 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 TMEM270Q6UE05 265 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 RUFY4Q6ZNE9 571 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CATSPER4Q7RTX7 472 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 PEX26Q7Z412 305 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CDR2LQ86X02 465 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 MCOLN2Q8IZK6 566 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 C7orf31Q8N865 590 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 NOA1Q8NC60 698 aaKnown RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 RBBP8NLQ8NC74 664 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 DNAJB3Q8WWF6 145 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 ZNF606Q8WXB4 792 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 LENG1Q96BZ8 264 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CPB2Q96IY4 423 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 ZNF668Q96K58 619 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CAPNS2Q96L46 248 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CCDC94Q9BW85 323 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 PARD6BQ9BYG5 372 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 ARHGAP39Q9C0H5 1083 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CARD9Q9H257 536 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 LHX5Q9H2C1 402 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CDHR5Q9HBB8 845 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 SPC25Q9HBM1 224 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 OSGEPQ9NPF4 335 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 ACP6Q9NPH0 428 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CISHQ9NSE2 258 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 CNTN3Q9P232 1028 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.61□□□□□ -1.034e-8■□□□□ 10.4
SFPQ-202ENST00000460428 SRRDQ9UH36 339 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 PUF60Q9UHX1 559 aaKnown RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 AMFRQ9UKV5 643 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 PCDHB4Q9Y5E5 795 aa8.61□□□□□ -1.03
SFPQ-202ENST00000460428 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 V9GYY5 206 aaPredicted RBP8.61□□□□□ -1.03
SFPQ-202ENST00000460428 MYADML2A6NDP7 307 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 TMCO5BA8MYB1 307 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
SFPQ-202ENST00000460428 NCK2O43639 380 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 ZRANB2O95218 330 aaKnown RBP eCLIP8.6□□□□□ -1.03
SFPQ-202ENST00000460428 TBC1D8O95759 1140 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 FTCDO95954 541 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 NFICP08651 508 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 FAM163BP0C2L3 166 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 RARBP10826 455 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 P4HA1P13674 534 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 KCNE1P15382 129 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 CYP3A5P20815 502 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 ABCB4P21439 1286 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 MCM3P25205 808 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 CTNNA2P26232 953 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 GNA15P30679 374 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 PAFAH1B1P43034 410 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 GSCP56915 257 aaPredicted RBP8.6□□□□□ -1.03
SFPQ-202ENST00000460428 NOMO3P69849 1222 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms