RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 FAM213AQ9BRX8 229 aa16.22■□□□□ 0.19
ATG4B-213ENST00000460211 EXOC1Q9NV70 894 aa16.22■□□□□ 0.19
ATG4B-213ENST00000460211 ZDBF2Q9HCK1 2354 aa16.22■□□□□ 0.19
ATG4B-213ENST00000460211 UBE4BO95155 1302 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 MEFVO15553 781 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-213ENST00000460211 FGFR3P22607 806 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 PAX3P23760 479 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 CASP1P29466 404 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 LRPAP1P30533 357 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 MCM4P33991 863 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 SNRPFP62306 86 aaKnown RBP16.21■□□□□ 0.19
ATG4B-213ENST00000460211 PSMD2Q13200 908 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 TMEM132DQ14C87 1099 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 ZBTB6Q15916 424 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 PSMD5Q16401 504 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 RTP2Q5QGT7 225 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 ATAT1Q5SQI0 421 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 JADE1Q6IE81 842 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 KANK3Q6NY19 840 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 ANKS3Q6ZW76 656 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 GRAMD1CQ8IYS0 662 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 LNX1Q8TBB1 728 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-213ENST00000460211 ZNF507Q8TCN5 953 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 HDAC7Q8WUI4 952 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 ASIC4Q96FT7 647 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 RIPOR3Q96MK2 946 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 NECTIN4Q96NY8 510 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 PRRX2Q99811 253 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 FGFBP2Q9BYJ0 223 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 S1PR5Q9H228 398 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 IKZF4Q9H2S9 585 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 ADAM7Q9H2U9 754 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 SFXN1Q9H9B4 322 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 TUBGCP4Q9UGJ1 667 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 C2CD2Q9Y426 696 aa16.21■□□□□ 0.19
ATG4B-213ENST00000460211 CITO14578 2027 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 SYN3O14994 580 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 EXTL3O43909 919 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 ZNF202O95125 648 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 MTHFRP42898 656 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 BRCC3P46736 316 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 EHHADHQ08426 723 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 RARS2Q5T160 578 aaKnown RBP16.2■□□□□ 0.18
ATG4B-213ENST00000460211 SPATA1Q5VX52 437 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 PRSS55Q6UWB4 352 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-213ENST00000460211 EPM2AIP1Q7L775 607 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-213ENST00000460211 HS2ST1Q7LGA3 356 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 PALB2Q86YC2 1186 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 NT5DC4Q86YG4 428 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 C3orf58Q8NDZ4 430 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 APPL2Q8NEU8 664 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 NOC3LQ8WTT2 800 aaKnown RBP16.2■□□□□ 0.18
ATG4B-213ENST00000460211 SUSD6Q92537 303 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 SAAL1Q96ER3 474 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 PLEKHA4Q9H4M7 779 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 KIAA1586Q9HCI6 787 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 SLC39A2Q9NP94 309 aa16.2■□□□□ 0.18
ATG4B-213ENST00000460211 ARHGEF37A1IGU5 675 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 H7C4K7 107 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 GFRA3O60609 400 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 PDGFBP01127 241 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-213ENST00000460211 RPL17P18621 184 aaKnown RBP16.19■□□□□ 0.18
ATG4B-213ENST00000460211 AVPR2P30518 371 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 PTPN21Q16825 1174 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 CD300LGQ6UXG3 332 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 KRBA2Q6ZNG9 492 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 GLYCTKQ8IVS8 523 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 GPD1LQ8N335 351 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 GLIS3Q8NEA6 775 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 CACTINQ8WUQ7 758 aaKnown RBP16.19■□□□□ 0.18
ATG4B-213ENST00000460211 ATOH1Q92858 354 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-213ENST00000460211 SUSD3Q96L08 255 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 CBWD1Q9BRT8 395 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 PCIF1Q9H4Z3 704 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 MAN1C1Q9NR34 630 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 TSHZ2Q9NRE2 1034 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 RBAKQ9NYW8 714 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-213ENST00000460211 CGNQ9P2M7 1197 aaKnown RBP16.19■□□□□ 0.18
ATG4B-213ENST00000460211 CDH22Q9UJ99 828 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 BACE2Q9Y5Z0 518 aa16.19■□□□□ 0.18
ATG4B-213ENST00000460211 GOLGA8IPA6NC78 632 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 ZNF233A6NK53 670 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 GOLGA8JA6NMD2 632 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 I3L4J1 428 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 TGM5O43548 720 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 KIF20AO95235 890 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 RPN1P04843 607 aaKnown RBP16.18■□□□□ 0.18
ATG4B-213ENST00000460211 NFICP08651 508 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 TKTP29401 623 aaKnown RBP16.18■□□□□ 0.18
ATG4B-213ENST00000460211 SURF1Q15526 300 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 KMT5BQ4FZB7 885 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 CRELD2Q6UXH1 353 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-213ENST00000460211 CYP26C1Q6V0L0 522 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 DSTYKQ6XUX3 929 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 BRSK2Q8IWQ3 736 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 NELFCDQ8IXH7 590 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 C12orf76Q8N812 135 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-213ENST00000460211 GOLGA5Q8TBA6 731 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 SCFD1Q8WVM8 642 aa16.18■□□□□ 0.18
ATG4B-213ENST00000460211 CLSTN3Q9BQT9 956 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms