RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 NUDT12Q9BQG2 462 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 PSMC3IPQ9P2W1 217 aaPredicted RBP15.56■□□□□ 0.08
PTPRU-205ENST00000460170 RALAP11233 206 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 GZMAP12544 262 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 GTF2H1P32780 548 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 IER5Q5VY09 327 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 ARHGEF26Q96DR7 871 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 TTC1Q99614 292 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 RAB6BQ9NRW1 208 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 TRAF3IP3Q9Y228 551 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 SMIM22K7EJ46 135 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 WEE2P0C1S8 567 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 ACTR2P61160 394 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 TMEM132DQ14C87 1099 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 ITPRIPL1Q6GPH6 555 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 RPAINQ86UA6 219 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 C4orf33Q8N1A6 199 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 ARL8AQ96BM9 186 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 ELP3Q9H9T3 547 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 INPP5FQ9Y2H2 1132 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 PIK3R2O00459 728 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 PID1Q7Z2X4 250 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 CHST13Q8NET6 341 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 ALKBH8Q96BT7 664 aaKnown RBP15.56■□□□□ 0.08
PTPRU-205ENST00000460170 ALG13Q9NP73 1137 aaKnown RBP15.56■□□□□ 0.08
PTPRU-205ENST00000460170 CLGNO14967 610 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 APRTP07741 180 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 RGS7P49802 495 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 PAPOLAP51003 745 aaKnown RBP15.55■□□□□ 0.08
PTPRU-205ENST00000460170 OCRLQ01968 901 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 MEA1Q16626 185 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 ATF7IP2Q5U623 682 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 DDX27Q96GQ7 796 aaKnown RBP15.55■□□□□ 0.08
PTPRU-205ENST00000460170 MAP3K20Q9NYL2 800 aaKnown RBP15.55■□□□□ 0.08
PTPRU-205ENST00000460170 LCP1P13796 627 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 TSPY1Q01534 308 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 MYBPC2Q14324 1141 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 PRAMEF18Q5VWM3 479 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 FBXW10Q5XX13 1052 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 ACAD11Q709F0 780 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 SCG3Q8WXD2 468 aaKnown RBP15.55■□□□□ 0.08
PTPRU-205ENST00000460170 RICTORQ6R327 1708 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 WTIPA6NIX2 430 aaPredicted RBP15.55■□□□□ 0.08
PTPRU-205ENST00000460170 MAGEB2O15479 319 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 CST8O60676 142 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 IL18RAPO95256 599 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 C1orf146Q5VVC0 180 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 SCN4BQ8IWT1 228 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 C2orf69Q8N8R5 385 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 SPDL1Q96EA4 605 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 OSGEPQ9NPF4 335 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 RNF181Q9P0P0 153 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 CCDC22O60826 627 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 NPTX2P47972 431 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 CUL2Q13617 745 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 PDZD8Q8NEN9 1154 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 ANKRD26Q9UPS8 1709 aa15.55■□□□□ 0.08
PTPRU-205ENST00000460170 DIAPH2O60879 1101 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 CYP11B1P15538 503 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 THEGQ9P2T0 379 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 CASP2P42575 452 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 GMPSP49915 693 aaPredicted RBP15.54■□□□□ 0.08
PTPRU-205ENST00000460170 EPHB1P54762 984 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 TEX2Q8IWB9 1127 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 SMYD3Q9H7B4 428 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 INTS13Q9NVM9 706 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 ZFATQ9P243 1243 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 XPO7Q9UIA9 1087 aaKnown RBP15.54■□□□□ 0.08
PTPRU-205ENST00000460170 PPP1R12AO14974 1030 aaPredicted RBP15.54■□□□□ 0.08
PTPRU-205ENST00000460170 LRRC31Q6UY01 552 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 LRRC71Q8N4P6 559 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 ZNF507Q8TCN5 953 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 FAM161BQ96MY7 647 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 WWP1Q9H0M0 922 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 ZC3H7BQ9UGR2 993 aaKnown RBP15.54■□□□□ 0.08
PTPRU-205ENST00000460170 GLI1P08151 1106 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 RBP3P10745 1247 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 RPS12P25398 132 aaKnown RBP15.54■□□□□ 0.08
PTPRU-205ENST00000460170 TRPM8Q7Z2W7 1104 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 KCNV2Q8TDN2 545 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 BTBD6Q96KE9 485 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 BEGAINQ9BUH8 593 aa15.54■□□□□ 0.08
PTPRU-205ENST00000460170 CHEK2O96017 543 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 VEGFAP15692 232 aaPredicted RBP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 SESN2P58004 480 aaPredicted RBP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 SYCP2LQ5T4T6 812 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 COL23A1Q86Y22 540 aaPredicted RBP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 RIBC1Q8N443 379 aaPredicted RBP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 CCNYL1Q8N7R7 359 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 UPF3AQ9H1J1 476 aaKnown RBP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 RSAD1Q9HA92 442 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 PRMT7Q9NVM4 692 aaPredicted RBP15.53■□□□□ 0.08
PTPRU-205ENST00000460170 GGA3Q9NZ52 723 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 TRIM33Q9UPN9 1127 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 SMAPO00193 183 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 CORO7P57737 925 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 MDM1Q8TC05 714 aa15.53■□□□□ 0.08
PTPRU-205ENST00000460170 SPATA18Q8TC71 538 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms