RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TADA2AO75478 443 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 PDGFBP01127 241 aaPredicted RBP16.96■□□□□ 0.31
SDF4-204ENST00000459994 PROZP22891 400 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 PRCPP42785 496 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 STIM1Q13586 685 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 USP41Q3LFD5 358 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 DPCR1Q3MIW9 517 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 ZNF568Q3ZCX4 644 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 L1TD1Q5T7N2 865 aaKnown RBP16.96■□□□□ 0.31
SDF4-204ENST00000459994 SMYD4Q8IYR2 804 aaPredicted RBP16.96■□□□□ 0.31
SDF4-204ENST00000459994 ZMAT2Q96NC0 199 aaKnown RBP16.96■□□□□ 0.31
SDF4-204ENST00000459994 NECTIN4Q96NY8 510 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 STK39Q9UEW8 545 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 DACH1Q9UI36 760 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 CCDC195A0A1B0GUA6 201 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 SPDYE4A6NLX3 237 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 I3L4J1 428 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 TGM5O43548 720 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 PRPF6O94906 941 aaKnown RBP16.95■□□□□ 0.3
SDF4-204ENST00000459994 GLUD1P00367 558 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 ADH1AP07327 375 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 HARSP12081 509 aaKnown RBP16.95■□□□□ 0.3
SDF4-204ENST00000459994 GRM5P41594 1212 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 CLCNKBP51801 687 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 ZC2HC1CQ53FD0 456 aaPredicted RBP16.95■□□□□ 0.3
SDF4-204ENST00000459994 ATAT1Q5SQI0 421 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 FAM171A1Q5VUB5 890 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 LILRA6Q6PI73 481 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 LRSAM1Q6UWE0 723 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 ALKAL1Q6UXT8 129 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 CEP57Q86XR8 500 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 KREMEN2Q8NCW0 462 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 ZNF707Q96C28 371 aaPredicted RBP16.95■□□□□ 0.3
SDF4-204ENST00000459994 DHTKD1Q96HY7 919 aaPredicted RBP16.95■□□□□ 0.3
SDF4-204ENST00000459994 ACCSQ96QU6 501 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 CLSTN3Q9BQT9 956 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 MRPL4Q9BYD3 311 aaKnown RBP16.95■□□□□ 0.3
SDF4-204ENST00000459994 TMEM206Q9H813 350 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 LIMD1Q9UGP4 676 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 TBX20Q9UMR3 447 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 NR2E1Q9Y466 385 aa16.95■□□□□ 0.3
SDF4-204ENST00000459994 SMIM28A0A1B0GU29 152 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 PSMA7O14818 248 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 CAVIN2O95810 425 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 CD44P16070 742 aaKnown RBP16.94■□□□□ 0.3
SDF4-204ENST00000459994 HOXD13P35453 343 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 BRCC3P46736 316 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 XKR4Q5GH76 650 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 RSPO2Q6UXX9 243 aaPredicted RBP16.94■□□□□ 0.3
SDF4-204ENST00000459994 MAP4K3Q8IVH8 894 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 LNX1Q8TBB1 728 aaPredicted RBP16.94■□□□□ 0.3
SDF4-204ENST00000459994 FNIP2Q9P278 1114 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 EXOC7Q9UPT5 735 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 SSX2IPQ9Y2D8 614 aa16.94■□□□□ 0.3
SDF4-204ENST00000459994 SF3B1O75533 1304 aaKnown RBP eCLIP16.94■□□□□ 0.33e-10■■■■■ 167.3
SDF4-204ENST00000459994 TSC2P49815 1807 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 PIGRP01833 764 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 ERCC5P28715 1186 aaPredicted RBP16.93■□□□□ 0.3
SDF4-204ENST00000459994 SNRPFP62306 86 aaKnown RBP16.93■□□□□ 0.3
SDF4-204ENST00000459994 SIGLEC14Q08ET2 396 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 STRN3Q13033 797 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 KNOP1Q1ED39 458 aaKnown RBP16.93■□□□□ 0.3
SDF4-204ENST00000459994 IER5LQ5T953 404 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 CENPPQ6IPU0 288 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 FOXR2Q6PJQ5 311 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 MPZL3Q6UWV2 235 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 TDRD5Q8NAT2 981 aaKnown RBP16.93■□□□□ 0.3
SDF4-204ENST00000459994 PBXIP1Q96AQ6 731 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 C18orf25Q96B23 403 aaPredicted RBP16.93■□□□□ 0.3
SDF4-204ENST00000459994 FAM122AQ96E09 287 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 SNX27Q96L92 541 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 KCTD10Q9H3F6 313 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 MAPK8IP1Q9UQF2 711 aa16.93■□□□□ 0.3
SDF4-204ENST00000459994 PDXKO00764 312 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 CCNE1P24864 410 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 TKTP29401 623 aaKnown RBP16.92■□□□□ 0.3
SDF4-204ENST00000459994 VCPP55072 806 aaKnown RBP16.92■□□□□ 0.3
SDF4-204ENST00000459994 KCNA1Q09470 495 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 PSMD5Q16401 504 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 UPP1Q16831 310 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 ZPBP2Q6X784 338 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 C15orf39Q6ZRI6 1047 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 BMP8AQ7Z5Y6 402 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 ZDHHC14Q8IZN3 488 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 ST13P5Q8NFI4 369 aaPredicted RBP16.92■□□□□ 0.3
SDF4-204ENST00000459994 CMASQ8NFW8 434 aaPredicted RBP16.92■□□□□ 0.3
SDF4-204ENST00000459994 PIK3R5Q8WYR1 880 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 TTPALQ9BTX7 342 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 NAT10Q9H0A0 1025 aaKnown RBP16.92■□□□□ 0.3
SDF4-204ENST00000459994 CGNQ9P2M7 1197 aaKnown RBP16.92■□□□□ 0.3
SDF4-204ENST00000459994 ANKFY1Q9P2R3 1169 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 MUC6Q6W4X9 2439 aa16.92■□□□□ 0.3
SDF4-204ENST00000459994 COL4A3Q01955 1670 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 TMEM189-UBE2V1I3L0A0 370 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 MCF2P10911 925 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 TNFSF9P41273 254 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 SPAG1Q07617 926 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 PAK1Q13153 545 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 SLC10A6Q3KNW5 377 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 ANO6Q4KMQ2 910 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms