RNA–Protein interactions for RNA: ENST00000459982.5

IRF1-206, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-206ENST00000459982 PTPRJQ12913 1337 aa17.97■□□□□ 0.47
IRF1-206ENST00000459982 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.96■□□□□ 0.47
IRF1-206ENST00000459982 AKAP3O75969 853 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 URODP06132 367 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 TMEM191BP0C7N4 346 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 TNNI1P19237 187 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 GTF2F1P35269 517 aaKnown RBP eCLIP17.96■□□□□ 0.47
IRF1-206ENST00000459982 GLUD2P49448 558 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 LRRC63Q05C16 580 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 HYAL1Q12794 435 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 DUOXA2Q1HG44 320 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 RTP2Q5QGT7 225 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 WDR49Q8IV35 697 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 C1orf127Q8N9H9 656 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 PARD3BQ8TEW8 1205 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 NELFBQ8WX92 580 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 PPP2R3CQ969Q6 453 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 EEF2KMTQ96G04 330 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 ANKRD36BP1Q96IX9 119 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 TTPALQ9BTX7 342 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 MTMR12Q9C0I1 747 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 SSX2IPQ9Y2D8 614 aa17.96■□□□□ 0.47
IRF1-206ENST00000459982 CETN3O15182 167 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 MAPK13O15264 365 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 FGFR3P22607 806 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 PSMC2P35998 433 aaKnown RBP17.95■□□□□ 0.46
IRF1-206ENST00000459982 NRIP1P48552 1158 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 LILRA4P59901 499 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 FKBP3Q00688 224 aaKnown RBP17.95■□□□□ 0.46
IRF1-206ENST00000459982 SKIV2LQ15477 1246 aaKnown RBP17.95■□□□□ 0.46
IRF1-206ENST00000459982 SCARA3Q6AZY7 606 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 CSGALNACT2Q8N6G5 542 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 CXorf38Q8TB03 319 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 RIN2Q8WYP3 895 aaPredicted RBP17.95■□□□□ 0.46
IRF1-206ENST00000459982 ZNF516Q92618 1163 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 SUSD3Q96L08 255 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 CGRRF1Q99675 332 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 AGAP1Q9UPQ3 857 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 PRUNE2Q8WUY3 3088 aa17.95■□□□□ 0.46
IRF1-206ENST00000459982 LRRIQ3A6PVS8 624 aaPredicted RBP17.94■□□□□ 0.46
IRF1-206ENST00000459982 SPTLC1O15269 473 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 TNNC2P02585 160 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 ITGB3P05106 788 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 TKTP29401 623 aaKnown RBP17.94■□□□□ 0.46
IRF1-206ENST00000459982 POLR2BP30876 1174 aaKnown RBP17.94■□□□□ 0.46
IRF1-206ENST00000459982 AARSP49588 968 aaKnown RBP eCLIP17.94■□□□□ 0.46
IRF1-206ENST00000459982 STX17P56962 302 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 CLDN10P78369 228 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 DUSP6Q16828 381 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.94■□□□□ 0.46
IRF1-206ENST00000459982 RBM43Q6ZSC3 357 aaKnown RBP17.94■□□□□ 0.46
IRF1-206ENST00000459982 ZC3H3Q8IXZ2 948 aaKnown RBP17.94■□□□□ 0.46
IRF1-206ENST00000459982 GPR65Q8IYL9 337 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 FAM186BQ8IYM0 893 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 LNX1Q8TBB1 728 aaPredicted RBP17.94■□□□□ 0.46
IRF1-206ENST00000459982 TMC2Q8TDI7 906 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 KLHL5Q96PQ7 755 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 DUSP9Q99956 384 aaKnown RBP17.94■□□□□ 0.46
IRF1-206ENST00000459982 RXFP1Q9HBX9 757 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 SIX4Q9UIU6 781 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 ITGA11Q9UKX5 1188 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 CTNND2Q9UQB3 1225 aa17.94■□□□□ 0.46
IRF1-206ENST00000459982 M0QZQ0 153 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 NCK2O43639 380 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 CLASP2O75122 1294 aaKnown RBP17.93■□□□□ 0.46
IRF1-206ENST00000459982 KRT19P08727 400 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 CNPP09543 421 aaKnown RBP17.93■□□□□ 0.46
IRF1-206ENST00000459982 PAX3P23760 479 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 NLRP12P59046 1061 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 DLG4P78352 724 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 RBP5P82980 135 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 PAK1Q13153 545 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 TTI2Q6NXR4 508 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 PRSS55Q6UWB4 352 aaPredicted RBP17.93■□□□□ 0.46
IRF1-206ENST00000459982 DSTYKQ6XUX3 929 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 TRAPPC11Q7Z392 1133 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 MLKLQ8NB16 471 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 PIK3R5Q8WYR1 880 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 BORCS6Q96GS4 357 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 CDCA3Q99618 268 aaPredicted RBP17.93■□□□□ 0.46
IRF1-206ENST00000459982 EMILIN2Q9BXX0 1053 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 PRDM6Q9NQX0 595 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 XIRP2A4UGR9 3374 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 SCN1AP35498 2009 aa17.93■□□□□ 0.46
IRF1-206ENST00000459982 VWA8A3KMH1 1905 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 BICDL2A1A5D9 508 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 SYN3O14994 580 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 LINC01565O15544 149 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 CST3P01034 146 aaPredicted RBP17.92■□□□□ 0.46
IRF1-206ENST00000459982 TAF6P49848 677 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 VAMP7P51809 220 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 ADAM15Q13444 863 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 COL19A1Q14993 1142 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 C1orf220Q5T0J3 134 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 CCDC183Q5T5S1 534 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 FOXR2Q6PJQ5 311 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 INTS8Q75QN2 995 aaKnown RBP17.92■□□□□ 0.46
IRF1-206ENST00000459982 EFHBQ8N7U6 833 aa17.92■□□□□ 0.46
IRF1-206ENST00000459982 PABPC5Q96DU9 382 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms