RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 FRMD4BQ9Y2L6 1034 aa13.87□□□□□ -0.19
COL18A1-206ENST00000459895 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-206ENST00000459895 SPTBN5Q9NRC6 3674 aaKnown RBP13.86□□□□□ -0.19
COL18A1-206ENST00000459895 BICDL2A1A5D9 508 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 C2CD2LO14523 706 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 MAPK13O15264 365 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 SPTLC1O15269 473 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 TADA2AO75478 443 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 CTSAP10619 480 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 EPB41P11171 864 aaKnown RBP13.86□□□□□ -0.19
COL18A1-206ENST00000459895 RPL13P26373 211 aaKnown RBP13.86□□□□□ -0.19
COL18A1-206ENST00000459895 RPL9P32969 192 aaKnown RBP13.86□□□□□ -0.19
COL18A1-206ENST00000459895 AARSP49588 968 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL18A1-206ENST00000459895 BFSP1Q12934 665 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 ADAM9Q13443 819 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 SMC1AQ14683 1233 aaKnown RBP13.86□□□□□ -0.19
COL18A1-206ENST00000459895 SURF1Q15526 300 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 DCLRE1AQ6PJP8 1040 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 C11orf57Q6ZUT1 292 aaPredicted RBP13.86□□□□□ -0.19
COL18A1-206ENST00000459895 MLKLQ8NB16 471 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 MAFAQ8NHW3 353 aaPredicted RBP13.86□□□□□ -0.19
COL18A1-206ENST00000459895 PARD3BQ8TEW8 1205 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 ANKRD36BP1Q96IX9 119 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 ZNF560Q96MR9 790 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 MKNK1Q9BUB5 465 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 LMCD1Q9NZU5 365 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 NUB1Q9Y5A7 615 aa13.86□□□□□ -0.19
COL18A1-206ENST00000459895 C2orf71A6NGG8 1288 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 PIRO00625 290 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 CETN3O15182 167 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 TNNC2P02585 160 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 TNNI1P19237 187 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 PTMSP20962 102 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 GTF2F1P35269 517 aaKnown RBP eCLIP13.85□□□□□ -0.193e-9■■■■□ 20.2
COL18A1-206ENST00000459895 PSMC2P35998 433 aaKnown RBP13.85□□□□□ -0.19
COL18A1-206ENST00000459895 FKBP3Q00688 224 aaKnown RBP13.85□□□□□ -0.19
COL18A1-206ENST00000459895 DSG1Q02413 1049 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 CCDC85BQ15834 202 aaPredicted RBP13.85□□□□□ -0.19
COL18A1-206ENST00000459895 STX1AQ16623 288 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 FAM171A1Q5VUB5 890 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 TDRD10Q5VZ19 366 aaKnown RBP13.85□□□□□ -0.19
COL18A1-206ENST00000459895 FOXR2Q6PJQ5 311 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 PRSS55Q6UWB4 352 aaPredicted RBP13.85□□□□□ -0.19
COL18A1-206ENST00000459895 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.85□□□□□ -0.19
COL18A1-206ENST00000459895 INTS8Q75QN2 995 aaKnown RBP13.85□□□□□ -0.19
COL18A1-206ENST00000459895 TMC7Q7Z402 723 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 ZNF516Q92618 1163 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 SYAP1Q96A49 352 aaPredicted RBP13.85□□□□□ -0.19
COL18A1-206ENST00000459895 SUSD3Q96L08 255 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 PUF60Q9UHX1 559 aaKnown RBP13.85□□□□□ -0.19
COL18A1-206ENST00000459895 RWDD2AQ9UIY3 292 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 MYO9BQ13459 2157 aa13.85□□□□□ -0.19
COL18A1-206ENST00000459895 DENND4AQ7Z401 1863 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 KRT19P08727 400 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 FGFR3P22607 806 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 NRIP1P48552 1158 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 TAF6P49848 677 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 VAMP7P51809 220 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 CLDN10P78369 228 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 RBM10P98175 930 aaKnown RBP13.84□□□□□ -0.19
COL18A1-206ENST00000459895 HYAL1Q12794 435 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 ELAVL2Q12926 359 aaKnown RBP13.84□□□□□ -0.19
COL18A1-206ENST00000459895 USP41Q3LFD5 358 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 DCAF17Q5H9S7 520 aaPredicted RBP13.84□□□□□ -0.19
COL18A1-206ENST00000459895 TRAPPC11Q7Z392 1133 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 CSGALNACT2Q8N6G5 542 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 VN1R2Q8NFZ6 395 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 TMC2Q8TDI7 906 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 PPM1EQ8WY54 764 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 RIN2Q8WYP3 895 aaPredicted RBP13.84□□□□□ -0.19
COL18A1-206ENST00000459895 BORCS6Q96GS4 357 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 CEP63Q96MT8 703 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 MMRN2Q9H8L6 949 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 NGRNQ9NPE2 291 aaKnown RBP13.84□□□□□ -0.19
COL18A1-206ENST00000459895 CHST7Q9NS84 486 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 STK39Q9UEW8 545 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 AGAP1Q9UPQ3 857 aa13.84□□□□□ -0.19
COL18A1-206ENST00000459895 M0QZQ0 153 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 LINC01565O15544 149 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 TBX10O75333 385 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 GLP2RO95838 553 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 KRT13P13646 458 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 RPL17P18621 184 aaKnown RBP13.83□□□□□ -0.2
COL18A1-206ENST00000459895 LILRA4P59901 499 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 TYRO3Q06418 890 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 PPP3CAQ08209 521 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 BIRC3Q13489 604 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 PSMD5Q16401 504 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 DUOXA2Q1HG44 320 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 SV2CQ496J9 727 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 CCDC40Q4G0X9 1142 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 KIAA0319Q5VV43 1072 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 PDE12Q6L8Q7 609 aaKnown RBP13.83□□□□□ -0.2
COL18A1-206ENST00000459895 RBM23Q86U06 439 aaKnown RBP13.83□□□□□ -0.2
COL18A1-206ENST00000459895 CEP57Q86XR8 500 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 LRRC52Q8N7C0 313 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 MICAL1Q8TDZ2 1067 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 CACTINQ8WUQ7 758 aaKnown RBP13.83□□□□□ -0.2
COL18A1-206ENST00000459895 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 TTPALQ9BTX7 342 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms