RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CNTN6Q9UQ52 1028 aa26.21■■□□□ 1.79
U2AF1-204ENST00000459639 SGPL1O95470 568 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 ITGB3P05106 788 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 CCL5P13501 91 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 NFX1Q12986 1120 aaKnown RBP26.2■■□□□ 1.78
U2AF1-204ENST00000459639 MTFR1Q15390 333 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 UBR7Q8N806 425 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 USP38Q8NB14 1042 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 SMG8Q8ND04 991 aaKnown RBP26.2■■□□□ 1.78
U2AF1-204ENST00000459639 DEFB118Q96PH6 123 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 VRTNQ9H8Y1 702 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 DPP3Q9NY33 737 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 OGDHLQ9ULD0 1010 aa26.2■■□□□ 1.78
U2AF1-204ENST00000459639 CYP11B1P15538 503 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 BPIFB4P59827 614 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 ZBTB6Q15916 424 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 XKR4Q5GH76 650 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 NOP9Q86U38 636 aaKnown RBP26.19■■□□□ 1.78
U2AF1-204ENST00000459639 SLC47A2Q86VL8 602 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 SLC20A1Q8WUM9 679 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 WDR24Q96S15 920 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 APOL6Q9BWW8 343 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 TRPV6Q9H1D0 765 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 AGO3Q9H9G7 860 aaKnown RBP26.19■■□□□ 1.78
U2AF1-204ENST00000459639 STAU1O95793 577 aaKnown RBP26.19■■□□□ 1.78
U2AF1-204ENST00000459639 PAK2Q13177 524 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 LPIN1Q14693 890 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 ZNF667Q5HYK9 610 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 ZNF569Q5MCW4 686 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 U2AF1L4Q8WU68 220 aaKnown RBP26.19■■□□□ 1.78
U2AF1-204ENST00000459639 RNF208Q9H0X6 261 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 INTUQ9ULD6 942 aa26.19■■□□□ 1.78
U2AF1-204ENST00000459639 R3HCC1Q9Y3T6 440 aaKnown RBP26.19■■□□□ 1.78
U2AF1-204ENST00000459639 GHRP10912 638 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 KCNE1P15382 129 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 AKAP5P24588 427 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 POLR2BP30876 1174 aaKnown RBP26.18■■□□□ 1.78
U2AF1-204ENST00000459639 RBP5P82980 135 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 ZNF618Q5T7W0 954 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 RPUSD2Q8IZ73 545 aaKnown RBP26.18■■□□□ 1.78
U2AF1-204ENST00000459639 BEST2Q8NFU1 509 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 ZMAT2Q96NC0 199 aaKnown RBP26.18■■□□□ 1.78
U2AF1-204ENST00000459639 FAM105AQ9NUU6 356 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 PARP2Q9UGN5 583 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 PADI3Q9ULW8 664 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 PCDHB4Q9Y5E5 795 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 PCDHB2Q9Y5E7 798 aa26.18■■□□□ 1.78
U2AF1-204ENST00000459639 CKBP12277 381 aa26.17■■□□□ 1.78
U2AF1-204ENST00000459639 CD52P31358 61 aa26.17■■□□□ 1.78
U2AF1-204ENST00000459639 CASQ1P31415 396 aa26.17■■□□□ 1.78
U2AF1-204ENST00000459639 ASPAP45381 313 aa26.17■■□□□ 1.78
U2AF1-204ENST00000459639 YWHAEP62258 255 aaKnown RBP26.17■■□□□ 1.78
U2AF1-204ENST00000459639 CDR2Q01850 454 aa26.17■■□□□ 1.78
U2AF1-204ENST00000459639 HACE1Q8IYU2 909 aa26.17■■□□□ 1.78
U2AF1-204ENST00000459639 SECISBP2LQ93073 1101 aaKnown RBP26.17■■□□□ 1.78
U2AF1-204ENST00000459639 UBQLN1Q9UMX0 589 aaKnown RBP26.17■■□□□ 1.78
U2AF1-204ENST00000459639 BTNL10A8MVZ5 291 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 FANCGO15287 622 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 ZSCAN20P17040 1043 aaPredicted RBP26.16■■□□□ 1.78
U2AF1-204ENST00000459639 CHRNB2P17787 502 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 CDK7P50613 346 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 ZNF677Q86XU0 584 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 TRAIPQ9BWF2 469 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 BCO2Q9BYV7 579 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 CXCL16Q9H2A7 254 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 RNF39Q9H2S5 420 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 AGAP1Q9UPQ3 857 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 DUSP10Q9Y6W6 482 aa26.16■■□□□ 1.78
U2AF1-204ENST00000459639 XPOTO43592 962 aaKnown RBP26.15■■□□□ 1.78
U2AF1-204ENST00000459639 H2AFZP0C0S5 128 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 GUCY2FP51841 1108 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 TMEM270Q6UE05 265 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 H2AFVQ71UI9 128 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 SLC35F6Q8N357 371 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 DNAJC5GQ8N7S2 189 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 RBBP8NLQ8NC74 664 aaPredicted RBP26.15■■□□□ 1.78
U2AF1-204ENST00000459639 CAGE1Q8TC20 777 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 DDX1Q92499 740 aaKnown RBP26.15■■□□□ 1.78
U2AF1-204ENST00000459639 PACSIN1Q9BY11 444 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 SEPT11Q9NVA2 429 aaKnown RBP26.15■■□□□ 1.78
U2AF1-204ENST00000459639 MACROD2A1Z1Q3 448 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 MYCP01106 439 aaPredicted RBP26.15■■□□□ 1.78
U2AF1-204ENST00000459639 P4HA1P13674 534 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 RAB27AP51159 221 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 ZNF132P52740 706 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 FMO1Q01740 532 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 TRAF7Q6Q0C0 670 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 RNF10Q8N5U6 811 aaKnown RBP26.15■■□□□ 1.78
U2AF1-204ENST00000459639 HPDLQ96IR7 371 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 OSBPL7Q9BZF2 842 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 ACP6Q9NPH0 428 aa26.15■■□□□ 1.78
U2AF1-204ENST00000459639 SMIM28A0A1B0GU29 152 aa26.14■■□□□ 1.78
U2AF1-204ENST00000459639 DSC3Q14574 896 aa26.14■■□□□ 1.78
U2AF1-204ENST00000459639 WDR72Q3MJ13 1102 aa26.14■■□□□ 1.78
U2AF1-204ENST00000459639 TAF3Q5VWG9 929 aa26.14■■□□□ 1.78
U2AF1-204ENST00000459639 TMEM130Q8N3G9 435 aa26.14■■□□□ 1.78
U2AF1-204ENST00000459639 CISHQ9NSE2 258 aa26.14■■□□□ 1.78
U2AF1-204ENST00000459639 KLK14Q9P0G3 267 aa26.14■■□□□ 1.78
U2AF1-204ENST00000459639 NXF1Q9UBU9 619 aaKnown RBP26.14■■□□□ 1.78
U2AF1-204ENST00000459639 TUBGCP4Q9UGJ1 667 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms