RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 NELL1Q92832 810 aa28.83■■■□□ 2.21
PBRM1-218ENST00000458294 C18orf25Q96B23 403 aaPredicted RBP28.83■■■□□ 2.21
PBRM1-218ENST00000458294 ZSCAN31Q96LW9 406 aaPredicted RBP28.83■■■□□ 2.21
PBRM1-218ENST00000458294 RUSC1Q9BVN2 902 aa28.83■■■□□ 2.21
PBRM1-218ENST00000458294 NCDNQ9UBB6 729 aa28.83■■■□□ 2.21
PBRM1-218ENST00000458294 FAM78AQ5JUQ0 283 aa28.82■■■□□ 2.2
PBRM1-218ENST00000458294 IQCEQ6IPM2 695 aa28.82■■■□□ 2.2
PBRM1-218ENST00000458294 APPL2Q8NEU8 664 aa28.82■■■□□ 2.2
PBRM1-218ENST00000458294 TCEAL4Q96EI5 215 aa28.82■■■□□ 2.2
PBRM1-218ENST00000458294 ASB16Q96NS5 453 aa28.82■■■□□ 2.2
PBRM1-218ENST00000458294 NTPCRQ9BSD7 190 aaKnown RBP28.82■■■□□ 2.2
PBRM1-218ENST00000458294 BRD9Q9H8M2 597 aa28.82■■■□□ 2.2
PBRM1-218ENST00000458294 PRMT8Q9NR22 394 aaPredicted RBP28.82■■■□□ 2.2
PBRM1-218ENST00000458294 AFF4Q9UHB7 1163 aaKnown RBP28.82■■■□□ 2.2
PBRM1-218ENST00000458294 KCNG1Q9UIX4 513 aa28.82■■■□□ 2.2
PBRM1-218ENST00000458294 PCDHB6Q9Y5E3 794 aa28.82■■■□□ 2.2
PBRM1-218ENST00000458294 SHISA7A6NL88 538 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 MAN2B1O00754 1011 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 LILRB5O75023 590 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 TOM1L1O75674 476 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 HARSP12081 509 aaKnown RBP28.81■■■□□ 2.2
PBRM1-218ENST00000458294 MCM4P33991 863 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 PRPHP41219 470 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 TOB1P50616 345 aaPredicted RBP28.81■■■□□ 2.2
PBRM1-218ENST00000458294 STRN3Q13033 797 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 FZD5Q13467 585 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 GPR161Q8N6U8 529 aaKnown RBP28.81■■■□□ 2.2
PBRM1-218ENST00000458294 DDX12PQ92771 950 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 TRMT61BQ9BVS5 477 aaKnown RBP28.81■■■□□ 2.2
PBRM1-218ENST00000458294 EPC1Q9H2F5 836 aa28.81■■■□□ 2.2
PBRM1-218ENST00000458294 SH2B1Q9NRF2 756 aaPredicted RBP28.81■■■□□ 2.2
PBRM1-218ENST00000458294 MED19A0JLT2 244 aaPredicted RBP28.8■■■□□ 2.2
PBRM1-218ENST00000458294 PP2D1A8MPX8 630 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 SLC16A4O15374 487 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 MEFVO15553 781 aaPredicted RBP28.8■■■□□ 2.2
PBRM1-218ENST00000458294 GUCY2CP25092 1073 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 CCR2P41597 374 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 GRM2Q14416 872 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 NOLC1Q14978 699 aaKnown RBP eCLIP28.8■■■□□ 2.2
PBRM1-218ENST00000458294 LEMD2Q8NC56 503 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 SPIRE2Q8WWL2 714 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 IRF7Q92985 503 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 ZNF512Q96ME7 567 aaPredicted RBP28.8■■■□□ 2.2
PBRM1-218ENST00000458294 TBC1D32Q96NH3 1257 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 FAM126AQ9BYI3 521 aaPredicted RBP28.8■■■□□ 2.2
PBRM1-218ENST00000458294 TRPV5Q9NQA5 729 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 COL4A2P08572 1712 aa28.8■■■□□ 2.2
PBRM1-218ENST00000458294 SLC10A6Q3KNW5 377 aa28.79■■■□□ 2.2
PBRM1-218ENST00000458294 DTHD1Q6ZMT9 781 aa28.79■■■□□ 2.2
PBRM1-218ENST00000458294 SMARCD2Q92925 531 aa28.79■■■□□ 2.2
PBRM1-218ENST00000458294 SECISBP2LQ93073 1101 aaKnown RBP28.79■■■□□ 2.2
PBRM1-218ENST00000458294 ZBTB45Q96K62 511 aaPredicted RBP28.79■■■□□ 2.2
PBRM1-218ENST00000458294 IER2Q9BTL4 223 aa28.79■■■□□ 2.2
PBRM1-218ENST00000458294 PPP4R2Q9NY27 417 aa28.79■■■□□ 2.2
PBRM1-218ENST00000458294 ANKFY1Q9P2R3 1169 aa28.79■■■□□ 2.2
PBRM1-218ENST00000458294 PCDHB8Q9UN66 801 aa28.79■■■□□ 2.2
PBRM1-218ENST00000458294 SEC24BO95487 1268 aa28.78■■■□□ 2.2
PBRM1-218ENST00000458294 PSMC3P17980 439 aa28.78■■■□□ 2.2
PBRM1-218ENST00000458294 TWF1Q12792 350 aa28.78■■■□□ 2.2
PBRM1-218ENST00000458294 ZPBP2Q6X784 338 aa28.78■■■□□ 2.2
PBRM1-218ENST00000458294 KCNK18Q7Z418 384 aa28.78■■■□□ 2.2
PBRM1-218ENST00000458294 ZNF687Q8N1G0 1237 aa28.78■■■□□ 2.2
PBRM1-218ENST00000458294 DEPDC1BQ8WUY9 529 aa28.78■■■□□ 2.2
PBRM1-218ENST00000458294 MMTAG2Q9BU76 263 aaKnown RBP28.78■■■□□ 2.2
PBRM1-218ENST00000458294 SMG5Q9UPR3 1016 aaKnown RBP28.78■■■□□ 2.2
PBRM1-218ENST00000458294 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.78■■■□□ 2.2
PBRM1-218ENST00000458294 SFI1A8K8P3 1242 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 CPB1P15086 417 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 CDC25AP30304 524 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 SMTNP53814 917 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 EPHA5P54756 1037 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 MTAPQ13126 283 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 IL17AQ16552 155 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 TSSK4Q6SA08 328 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 MAP4K3Q8IVH8 894 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 KCTD17Q8N5Z5 321 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 OXCT2Q9BYC2 517 aaPredicted RBP28.77■■■□□ 2.2
PBRM1-218ENST00000458294 CHRDQ9H2X0 955 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 ZNF334Q9HCZ1 680 aaPredicted RBP28.77■■■□□ 2.2
PBRM1-218ENST00000458294 ASAH2Q9NR71 780 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 CEP72Q9P209 647 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 TUBGCP4Q9UGJ1 667 aa28.77■■■□□ 2.2
PBRM1-218ENST00000458294 MYH11P35749 1972 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 MOSPD3O75425 235 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 PLS3P13797 630 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 SDHBP21912 280 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 MARCKSP29966 332 aaPredicted RBP28.76■■■□□ 2.19
PBRM1-218ENST00000458294 RSPO4Q2I0M5 234 aaPredicted RBP28.76■■■□□ 2.19
PBRM1-218ENST00000458294 VITQ6UXI7 678 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 MAMSTRQ6ZN01 415 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 HS6ST3Q8IZP7 471 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 TMEM161BQ8NDZ6 487 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 PLEKHA5Q9HAU0 1116 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 TRPV4Q9HBA0 871 aa28.76■■■□□ 2.19
PBRM1-218ENST00000458294 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.76■■■□□ 2.19
PBRM1-218ENST00000458294 NDRG2Q9UN36 371 aaKnown RBP28.76■■■□□ 2.19
PBRM1-218ENST00000458294 TICRRQ7Z2Z1 1910 aa28.75■■■□□ 2.19
PBRM1-218ENST00000458294 NRG2O14511 850 aaPredicted RBP28.75■■■□□ 2.19
PBRM1-218ENST00000458294 CLDN3O15551 220 aa28.75■■■□□ 2.19
PBRM1-218ENST00000458294 GDI1P31150 447 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms