RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CLDN3O15551 220 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 SCP2P22307 547 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 CDC25AP30304 524 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 IL17AQ16552 155 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 PRSS36Q5K4E3 855 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 CYP4A22Q5TCH4 519 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 IQCEQ6IPM2 695 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 MAML2Q8IZL2 1156 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-220ENST00000458038 SYT2Q8N9I0 419 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-220ENST00000458038 TMEM161BQ8NDZ6 487 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 CORO1BQ9BR76 489 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 ZFP14Q9HCL3 533 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 AFF4Q9UHB7 1163 aaKnown RBP23.51■■□□□ 1.35
CPNE1-220ENST00000458038 INSL5Q9Y5Q6 135 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 PATJQ8NI35 1801 aa23.51■■□□□ 1.35
CPNE1-220ENST00000458038 SFI1A8K8P3 1242 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 SPTLC1O15269 473 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 LRRN2O75325 713 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 MARCKSP29966 332 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-220ENST00000458038 MCM4P33991 863 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 ARPP19P56211 112 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 KYAT1Q16773 422 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 SLC10A6Q3KNW5 377 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 TPRG1Q6ZUI0 275 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 PDZD4Q76G19 769 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-220ENST00000458038 KCNK18Q7Z418 384 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 C18orf25Q96B23 403 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-220ENST00000458038 ZNF512Q96ME7 567 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-220ENST00000458038 TBC1D32Q96NH3 1257 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 TSPAN18Q96SJ8 248 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 LARSQ9P2J5 1176 aaKnown RBP23.5■■□□□ 1.35
CPNE1-220ENST00000458038 PCDHB8Q9UN66 801 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 MTF2Q9Y483 593 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-220ENST00000458038 PCDHGA2Q9Y5H1 932 aa23.5■■□□□ 1.35
CPNE1-220ENST00000458038 GPR179Q6PRD1 2367 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 MAN2B1O00754 1011 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 MAPTP10636 758 aaKnown RBP23.49■■□□□ 1.35
CPNE1-220ENST00000458038 CEBPBP17676 345 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 ATP2C1P98194 919 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-220ENST00000458038 MCL1Q07820 350 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 TANGO2Q6ICL3 276 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 ATRIPQ8WXE1 791 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 DDX12PQ92771 950 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 KCNN1Q92952 543 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 ZBTB45Q96K62 511 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-220ENST00000458038 KIF2CQ99661 725 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 HINFPQ9BQA5 517 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 TRPV5Q9NQA5 729 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 ANKFY1Q9P2R3 1169 aa23.49■■□□□ 1.35
CPNE1-220ENST00000458038 SLC26A4O43511 780 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 SEC24AO95486 1093 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 CLTAP09496 248 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 HARSP12081 509 aaKnown RBP23.48■■□□□ 1.35
CPNE1-220ENST00000458038 ADCY1Q08828 1119 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 ARL6IP4Q66PJ3 421 aaKnown RBP23.48■■□□□ 1.35
CPNE1-220ENST00000458038 SUMF1Q8NBK3 374 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 IRF7Q92985 503 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 CDK5RAP3Q96JB5 506 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 ASB16Q96NS5 453 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 TRMT61BQ9BVS5 477 aaKnown RBP23.48■■□□□ 1.35
CPNE1-220ENST00000458038 PLA2G2FQ9BZM2 168 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 GPR88Q9GZN0 384 aa23.48■■□□□ 1.35
CPNE1-220ENST00000458038 XPOTO43592 962 aaKnown RBP23.47■■□□□ 1.35
CPNE1-220ENST00000458038 OAZ2O95190 189 aa23.47■■□□□ 1.35
CPNE1-220ENST00000458038 CYP3A5P20815 502 aa23.47■■□□□ 1.35
CPNE1-220ENST00000458038 CD72P21854 359 aa23.47■■□□□ 1.35
CPNE1-220ENST00000458038 CSTF1Q05048 431 aaKnown RBP23.47■■□□□ 1.35
CPNE1-220ENST00000458038 ZRSR1Q15695 479 aaKnown RBP23.47■■□□□ 1.35
CPNE1-220ENST00000458038 MCTP1Q6DN14 999 aa23.47■■□□□ 1.35
CPNE1-220ENST00000458038 KIAA2013Q8IYS2 634 aa23.47■■□□□ 1.35
CPNE1-220ENST00000458038 FAM126AQ9BYI3 521 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-220ENST00000458038 BRD9Q9H8M2 597 aa23.47■■□□□ 1.35
CPNE1-220ENST00000458038 HEBP1Q9NRV9 189 aa23.47■■□□□ 1.35
CPNE1-220ENST00000458038 M0QZQ0 153 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 MEFVO15553 781 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-220ENST00000458038 CPB1P15086 417 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 PAX3P23760 479 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 FCARP24071 287 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 TARSP26639 723 aaKnown RBP23.46■■□□□ 1.35
CPNE1-220ENST00000458038 LRPAP1P30533 357 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 MATR3P43243 847 aaKnown RBP eCLIP23.46■■□□□ 1.35
CPNE1-220ENST00000458038 EPHA5P54756 1037 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 SLC12A3P55017 1021 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 FAM78AQ5JUQ0 283 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 MAMSTRQ6ZN01 415 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 GPR161Q8N6U8 529 aaKnown RBP23.46■■□□□ 1.35
CPNE1-220ENST00000458038 SMARCD2Q92925 531 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 TCEAL4Q96EI5 215 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 IER2Q9BTL4 223 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 ZSCAN32Q9NX65 697 aa23.46■■□□□ 1.35
CPNE1-220ENST00000458038 TTC26A0AVF1 554 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 PLA2G4BP0C869 781 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 PSMC3P17980 439 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 YWHAHQ04917 246 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-220ENST00000458038 RAD51AP2Q09MP3 1159 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 PLD1Q13393 1074 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 ZBTB44Q8NCP5 570 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 BEST2Q8NFU1 509 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 DEPDC1BQ8WUY9 529 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 NELL1Q92832 810 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms