RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 SAMSN1Q9NSI8 373 aaKnown RBP12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 ADAM28Q9UKQ2 775 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 ITGA11Q9UKX5 1188 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 PRG3Q9Y2Y8 225 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 NFE2L3Q9Y4A8 694 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 PPEF2O14830 753 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 PMM2O15305 246 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 LPXNO60711 386 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 B3GAT3O94766 335 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 CST3P01034 146 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 TNNC2P02585 160 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 ITGB3P05106 788 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 TRIM49P0CI25 452 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 TRIM49CP0CI26 452 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 ZNF445P59923 1031 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 GPM6BQ13491 265 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 CAMK1Q14012 370 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 TPD52L1Q16890 204 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 CCDC40Q4G0X9 1142 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 TDRD10Q5VZ19 366 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 LRSAM1Q6UWE0 723 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 SV2AQ7L0J3 742 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 LRRC52Q8N7C0 313 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 ARNTL2Q8WYA1 636 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 RABGGTAQ92696 567 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 CNOT6LQ96LI5 555 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 VN1R3Q9BXE9 311 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 CERS4Q9HA82 394 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 STK39Q9UEW8 545 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 MTUS1Q9ULD2 1270 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 COQ4Q9Y3A0 265 aa12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-212ENST00000457845 M0QZQ0 153 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 GRM6O15303 877 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 STX10O60499 249 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 VNN1O95497 513 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 STAU1O95793 577 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 ZNF18P17022 549 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 POU3F3P20264 500 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 LILRA4P59901 499 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 RBP5P82980 135 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 KRT17Q04695 432 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 ELAVL2Q12926 359 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 FUT10Q6P4F1 479 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 FAM114A1Q8IWE2 563 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 DHX40Q8IX18 779 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 GPR65Q8IYL9 337 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 SUSD3Q96L08 255 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 GPR62Q9BZJ7 368 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 LMAN2LQ9H0V9 348 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 TMEM8AQ9HCN3 771 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 ALG13Q9NP73 1137 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 CHST7Q9NS84 486 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 FANCLQ9NW38 375 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 AGAP1Q9UPQ3 857 aa12.69□□□□□ -0.38
TRAPPC12-212ENST00000457845 SMTNL1A8MU46 457 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 SPTLC1O15269 473 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 TADA2AO75478 443 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 SOD2P04179 222 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 DNAJB1P25685 340 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 EEF1GP26641 437 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 POLR2BP30876 1174 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 ATICP31939 592 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 PNPLA4P41247 253 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 BRCC3P46736 316 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 GCLMP48507 274 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 TAF6P49848 677 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 TIGD5Q53EQ6 642 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 KRT39Q6A163 491 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 AOPEPQ8N6M6 819 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 POF1BQ8WVV4 589 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 ZNF560Q96MR9 790 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 HERC2P3Q9BVR0 1158 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 ZBP1Q9H171 429 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 XYLT2Q9H1B5 865 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 LMCD1Q9NZU5 365 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 PUF60Q9UHX1 559 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 IRAK3Q9Y616 596 aa12.68□□□□□ -0.38
TRAPPC12-212ENST00000457845 SF3B1O75533 1304 aaKnown RBP eCLIP12.67□□□□□ -0.388e-6■■■■■ 107
TRAPPC12-212ENST00000457845 LRRC10BA6NIK2 292 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 KPNA7A9QM74 516 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 KCNJ18B7U540 433 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 RFXAPO00287 272 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 FSCN2O14926 492 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 SYN3O14994 580 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 P4HA2O15460 535 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 TRAPPC3O43617 180 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 LILRB3O75022 631 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 KRT19P08727 400 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 CTSAP10619 480 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 FGFR3P22607 806 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 FMO5P49326 533 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 MXI1P50539 228 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 ERVFC1P60507 584 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 KCNH2Q12809 1159 aa12.67□□□□□ -0.38
TRAPPC12-212ENST00000457845 KCNJ12Q14500 433 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms