RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 SLC16A3O15427 465 aaKnown RBP15.27■□□□□ 0.04
SMPD4-215ENST00000457039 LILRB3O75022 631 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 TMEM191BP0C7N4 346 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 BRCC3P46736 316 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 DLG4P78352 724 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 ELAVL2Q12926 359 aaKnown RBP15.27■□□□□ 0.04
SMPD4-215ENST00000457039 PTPN14Q15678 1187 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 DUOXA2Q1HG44 320 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 TIGD5Q53EQ6 642 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 KIAA0319Q5VV43 1072 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 TMC7Q7Z402 723 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 GPR65Q8IYL9 337 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 ANKRD36BP1Q96IX9 119 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 CEP63Q96MT8 703 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 NSUN3Q9H649 340 aaKnown RBP15.27■□□□□ 0.04
SMPD4-215ENST00000457039 NGRNQ9NPE2 291 aaKnown RBP15.27■□□□□ 0.04
SMPD4-215ENST00000457039 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 STXBP5LQ9Y2K9 1186 aa15.27■□□□□ 0.04
SMPD4-215ENST00000457039 HIDE1A8MVS5 230 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 IKBKBO14920 756 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 SPTLC1O15269 473 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 CSPG5O95196 566 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 ITGB3P05106 788 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 EPB41P11171 864 aaKnown RBP15.26■□□□□ 0.03
SMPD4-215ENST00000457039 TNNI1P19237 187 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 FGFR3P22607 806 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 ERCC5P28715 1186 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-215ENST00000457039 POLR2BP30876 1174 aaKnown RBP15.26■□□□□ 0.03
SMPD4-215ENST00000457039 GLUD2P49448 558 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 VAMP7P51809 220 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 LILRA4P59901 499 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 DSG1Q02413 1049 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 BFSP1Q12934 665 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 SMC1AQ14683 1233 aaKnown RBP15.26■□□□□ 0.03
SMPD4-215ENST00000457039 USP41Q3LFD5 358 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 CT47A1Q5JQC4 288 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-215ENST00000457039 RTP2Q5QGT7 225 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 FAM171A1Q5VUB5 890 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 PLPP4Q5VZY2 271 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-215ENST00000457039 C15orf39Q6ZRI6 1047 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 TRAPPC11Q7Z392 1133 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 FILIP1Q7Z7B0 1213 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 ADGRD2Q7Z7M1 963 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 MRPL43Q8N983 215 aaKnown RBP15.26■□□□□ 0.03
SMPD4-215ENST00000457039 SYAP1Q96A49 352 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-215ENST00000457039 SUSD3Q96L08 255 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 ENTPD7Q9NQZ7 604 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 DACH1Q9UI36 760 aa15.26■□□□□ 0.03
SMPD4-215ENST00000457039 C2orf71A6NGG8 1288 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 I3L4J1 428 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 M0QZQ0 153 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 TRAPPC3O43617 180 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 TNNC2P02585 160 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 C4BPAP04003 597 aaKnown RBP15.25■□□□□ 0.03
SMPD4-215ENST00000457039 PAX3P23760 479 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 AP3M2P53677 418 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 RBP5P82980 135 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 NFKBIBQ15653 356 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 TCEAL5Q5H9L2 206 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 SASS6Q6UVJ0 657 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 CSGALNACT2Q8N6G5 542 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 LRRC52Q8N7C0 313 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 MICAL1Q8TDZ2 1067 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 AUTS2Q8WXX7 1259 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 B3GALT6Q96L58 329 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 TTPALQ9BTX7 342 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 RXFP1Q9HBX9 757 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 AGAP1Q9UPQ3 857 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 NUB1Q9Y5A7 615 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 MYO7AQ13402 2215 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 VWA8A3KMH1 1905 aa15.25■□□□□ 0.03
SMPD4-215ENST00000457039 SCN1AP35498 2009 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 TULP1O00294 542 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-215ENST00000457039 SYN3O14994 580 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 CXCL14O95715 111 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 URODP06132 367 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 TRIM49P0CI25 452 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 TRIM49CP0CI26 452 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 KRT13P13646 458 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 TKTP29401 623 aaKnown RBP15.24■□□□□ 0.03
SMPD4-215ENST00000457039 PNPLA4P41247 253 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 TAF6P49848 677 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 MARSP56192 900 aaKnown RBP15.24■□□□□ 0.03
SMPD4-215ENST00000457039 PPP3CAQ08209 521 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 COL19A1Q14993 1142 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 STX1AQ16623 288 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 SKOR2Q2VWA4 1001 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-215ENST00000457039 ZACNQ401N2 412 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 TDRD10Q5VZ19 366 aaKnown RBP15.24■□□□□ 0.03
SMPD4-215ENST00000457039 FRMD5Q7Z6J6 570 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 USP37Q86T82 979 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 LNX1Q8TBB1 728 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-215ENST00000457039 PIK3R5Q8WYR1 880 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 ZNF560Q96MR9 790 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 SRRTQ9BXP5 876 aaKnown RBP15.24■□□□□ 0.03
SMPD4-215ENST00000457039 MRPL17Q9NRX2 175 aaKnown RBP15.24■□□□□ 0.03
SMPD4-215ENST00000457039 PCDHB8Q9UN66 801 aa15.24■□□□□ 0.03
SMPD4-215ENST00000457039 SPTBN5Q9NRC6 3674 aaKnown RBP15.24■□□□□ 0.03
SMPD4-215ENST00000457039 COL6A3P12111 3177 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms