RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 KRT6CP48668 564 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 RPL26P61254 145 aaKnown RBP5.25□□□□□ -1.57
PCDH9-203ENST00000456367 PRAMEP78395 509 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 BNIP1Q12981 228 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ACVR2BQ13705 512 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 FAM102BQ5T8I3 360 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 SLFN12LQ6IEE8 588 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 BNC2Q6ZN30 1099 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ZNF677Q86XU0 584 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 RHPN2Q8IUC4 686 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 PPIL6Q8IXY8 311 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 NBPF15Q8N660 670 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 FAR2Q96K12 515 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TBC1D10AQ9BXI6 508 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 CACYBPQ9HB71 228 aaKnown RBP5.25□□□□□ -1.57
PCDH9-203ENST00000456367 NSMCE4AQ9NXX6 385 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 PCDHA1Q9Y5I3 950 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 SQORQ9Y6N5 450 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 MYO5CQ9NQX4 1742 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 UNC13AQ9UPW8 1703 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 KCNQ3O43525 872 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TMEM191BP0C7N4 346 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 OSBPP22059 807 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 PSMA2P25787 234 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TYK2P29597 1187 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ST13P50502 369 aaKnown RBP5.25□□□□□ -1.57
PCDH9-203ENST00000456367 CDK16Q00536 496 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 BNC1Q01954 994 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ROR1Q01973 937 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 GRIK3Q13003 919 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 CCDC103Q8IW40 242 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 GALNT4Q8N4A0 578 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 DNAAF3Q8N9W5 541 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.25□□□□□ -1.57
PCDH9-203ENST00000456367 S100ZQ8WXG8 99 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 CEP95Q96GE4 821 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ECSITQ9BQ95 431 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TMEM120AQ9BXJ8 343 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 HEMGNQ9BXL5 484 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 KCNK4Q9NYG8 393 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 MPP6Q9NZW5 540 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ARHGAP20Q9P2F6 1191 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 GTF3C4Q9UKN8 822 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TMED5Q9Y3A6 229 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ARIH1Q9Y4X5 557 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-203ENST00000456367 PNMA8CA0A1B0GUJ8 204 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 GTPBP10A4D1E9 387 aaKnown RBP5.25□□□□□ -1.57
PCDH9-203ENST00000456367 PRR23AA6NEV1 266 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TRPC5OSA6NMA1 111 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 CYTH3O43739 400 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 FAM153BP0C7A2 387 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 FCER1AP12319 257 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ZNF12P17014 697 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 CDH3P22223 829 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 RAB27AP51159 221 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 KCNJ2P63252 427 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 IL1RL1Q01638 556 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 RUNX1T1Q06455 604 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 GRM1Q13255 1194 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 FAM153CQ494X1 144 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 XKR9Q5GH70 373 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 CENPPQ6IPU0 288 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TMC4Q7Z404 712 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ARID3BQ8IVW6 561 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-203ENST00000456367 LCORLQ8N3X6 602 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TTC39CQ8N584 583 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 BEST2Q8NFU1 509 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 RNF34Q969K3 372 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TMEM109Q9BVC6 243 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 TIPINQ9BVW5 301 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 ASPSCR1Q9BZE9 553 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 VPS11Q9H270 941 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 STMN3Q9NZ72 180 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 CARD8Q9Y2G2 431 aa5.25□□□□□ -1.57
PCDH9-203ENST00000456367 PREX2Q70Z35 1606 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 KIAA0391O15091 583 aaKnown RBP5.24□□□□□ -1.57
PCDH9-203ENST00000456367 EYA4O95677 639 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 GZMAP12544 262 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 CD44P16070 742 aaKnown RBP5.24□□□□□ -1.57
PCDH9-203ENST00000456367 COMTP21964 271 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 HNRNPH3P31942 346 aaKnown RBP5.24□□□□□ -1.57
PCDH9-203ENST00000456367 CDK7P50613 346 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 VAMP7P51809 220 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 STK4Q13043 487 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 FAM47CQ5HY64 1035 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 CCNJLQ8IV13 435 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 ZNF786Q8N393 782 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 ZCCHC7Q8N3Z6 543 aaKnown RBP5.24□□□□□ -1.57
PCDH9-203ENST00000456367 TGFBRAP1Q8WUH2 860 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 HDAC7Q8WUI4 952 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 APOL6Q9BWW8 343 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 SLC13A1Q9BZW2 595 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 ADNPQ9H2P0 1102 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 KCND2Q9NZV8 630 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 C6orf203Q9P0P8 240 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-203ENST00000456367 USP6P35125 1406 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 CRB1P82279 1406 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 AK9Q5TCS8 1911 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 UMODL1Q5DID0 1318 aa5.24□□□□□ -1.57
PCDH9-203ENST00000456367 A0A087X0T9 212 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms