RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 TFR2Q9UP52 801 aa8.04□□□□□ -1.12
ERCC3-204ENST00000456257 STXBP5LQ9Y2K9 1186 aa8.04□□□□□ -1.12
ERCC3-204ENST00000456257 TRPV2Q9Y5S1 764 aa8.04□□□□□ -1.12
ERCC3-204ENST00000456257 KAT6AQ92794 2004 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 INPPL1O15357 1258 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 PHACTR2O75167 634 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 SLU7O95391 586 aaKnown RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 FTLP02792 175 aaPredicted RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 PAEPP09466 180 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 CXCL8P10145 99 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 GRK4P32298 578 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 PIK3CAP42336 1068 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 MATR3P43243 847 aaKnown RBP eCLIP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 FAM189BP81408 668 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 RBP5P82980 135 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 IFI16Q16666 785 aaKnown RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 WHAMMP3Q1A5X7 153 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 CLEC16AQ2KHT3 1053 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 MEI1Q5TIA1 1274 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 LMBRD2Q68DH5 695 aaPredicted RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 PAXIP1Q6ZW49 1069 aaPredicted RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 RSRC2Q7L4I2 434 aaKnown RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 RNF180Q86T96 592 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 FAM228AQ86W67 206 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 CDR2LQ86X02 465 aaPredicted RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 LRRC52Q8N7C0 313 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 SMG8Q8ND04 991 aaKnown RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 U2AF1L4Q8WU68 220 aaKnown RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 SLC20A1Q8WUM9 679 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 RFFLQ8WZ73 363 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 WNT8BQ93098 351 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 ZMAT2Q96NC0 199 aaKnown RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 OSMRQ99650 979 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 CCDC94Q9BW85 323 aaPredicted RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 PACSIN1Q9BY11 444 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 EIF2AQ9BY44 585 aaKnown RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 MTMR12Q9C0I1 747 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 FAM49AQ9H0Q0 323 aaPredicted RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 LHX5Q9H2C1 402 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 ERVK-5Q9HDB9 667 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 HMX1Q9NP08 348 aaPredicted RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 AVENQ9NQS1 362 aaPredicted RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 GDAP2Q9NXN4 497 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 KIAA1257Q9ULG3 409 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 SNX12Q9UMY4 172 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 PCDHGC3Q9UN70 934 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 PHF24Q9UPV7 400 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 NOC2LQ9Y3T9 749 aaKnown RBP8.03□□□□□ -1.12
ERCC3-204ENST00000456257 CDY2AQ9Y6F7 541 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 CAPN6Q9Y6Q1 641 aa8.03□□□□□ -1.12
ERCC3-204ENST00000456257 GRID2IPA4D2P6 1211 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 EFCAB8A8MWE9 144 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 PIRO00625 290 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 GPR182O15218 404 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 TADA3O75528 432 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 URI1O94763 535 aaPredicted RBP8.02□□□□□ -1.13
ERCC3-204ENST00000456257 LSM8O95777 96 aaKnown RBP8.02□□□□□ -1.13
ERCC3-204ENST00000456257 CD4P01730 458 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 MMEP08473 750 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 NFICP08651 508 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 TMEM191BP0C7N4 346 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 TCP1P17987 556 aaKnown RBP8.02□□□□□ -1.13
ERCC3-204ENST00000456257 FGFR4P22455 802 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 PAX3P23760 479 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 LRPAP1P30533 357 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 ASPAP45381 313 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 YWHAEP62258 255 aaKnown RBP8.02□□□□□ -1.13
ERCC3-204ENST00000456257 GPC5P78333 572 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 TFAMQ00059 246 aaKnown RBP8.02□□□□□ -1.13
ERCC3-204ENST00000456257 INCA1Q0VD86 236 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 PTP4A2Q12974 167 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 BIRC3Q13489 604 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 TRPC3Q13507 836 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 ITGA7Q13683 1181 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 TMEM132DQ14C87 1099 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 SPOPLQ6IQ16 392 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 PALB2Q86YC2 1186 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 PHF13Q86YI8 300 aaPredicted RBP8.02□□□□□ -1.13
ERCC3-204ENST00000456257 CREG2Q8IUH2 290 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 RHOT2Q8IXI1 618 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 RPUSD2Q8IZ73 545 aaKnown RBP8.02□□□□□ -1.13
ERCC3-204ENST00000456257 ARRDC4Q8NCT1 418 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 RAET1EQ8TD07 263 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 WHAMMQ8TF30 809 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 ZNF606Q8WXB4 792 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 ZNF592Q92610 1267 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 FAM84AQ96KN4 292 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 RPS6KC1Q96S38 1066 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 ARID3AQ99856 593 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 ZSWIM1Q9BR11 485 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 IMPG2Q9BZV3 1241 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 ZNF518BQ9C0D4 1074 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 DPP3Q9NY33 737 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 TAS2R14Q9NYV8 317 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 TSKSQ9UJT2 592 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 GTF3C4Q9UKN8 822 aa8.02□□□□□ -1.13
ERCC3-204ENST00000456257 TTC7AQ9ULT0 858 aaPredicted RBP8.02□□□□□ -1.13
ERCC3-204ENST00000456257 SAR1BQ9Y6B6 198 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms