RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 GLUD1P00367 558 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 HOXD13P35453 343 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 ACOT2P49753 483 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 LILRA6Q6PI73 481 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 PRSS55Q6UWB4 352 aaPredicted RBP18.83■□□□□ 0.6
USP39-208ENST00000455732 TMC5Q6UXY8 1006 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 GPR149Q86SP6 731 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 LNX1Q8TBB1 728 aaPredicted RBP18.83■□□□□ 0.6
USP39-208ENST00000455732 SCFD1Q8WVM8 642 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 RIPOR3Q96MK2 946 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 TCHHQ07283 1943 aa18.82■□□□□ 0.6
USP39-208ENST00000455732 IL18RAPO95256 599 aa18.82■□□□□ 0.6
USP39-208ENST00000455732 RPL17P18621 184 aaKnown RBP18.82■□□□□ 0.6
USP39-208ENST00000455732 SNRPFP62306 86 aaKnown RBP18.82■□□□□ 0.6
USP39-208ENST00000455732 SPAG1Q07617 926 aa18.82■□□□□ 0.6
USP39-208ENST00000455732 ATAT1Q5SQI0 421 aa18.82■□□□□ 0.6
USP39-208ENST00000455732 SPATA1Q5VX52 437 aa18.82■□□□□ 0.6
USP39-208ENST00000455732 JADE1Q6IE81 842 aa18.82■□□□□ 0.6
USP39-208ENST00000455732 C15orf39Q6ZRI6 1047 aa18.82■□□□□ 0.6
USP39-208ENST00000455732 CMASQ8NFW8 434 aaPredicted RBP18.82■□□□□ 0.6
USP39-208ENST00000455732 HDAC7Q8WUI4 952 aa18.82■□□□□ 0.6
USP39-208ENST00000455732 CBWD1Q9BRT8 395 aa18.82■□□□□ 0.6
USP39-208ENST00000455732 SYN3O14994 580 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 TGM5O43548 720 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 EXTL3O43909 919 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 PAPLNO95428 1278 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 NFICP08651 508 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 BRCC3P46736 316 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 TMEM132DQ14C87 1099 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 PSMD5Q16401 504 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 ARMCX5Q6P1M9 558 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 KRBA2Q6ZNG9 492 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 CEP57Q86XR8 500 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 PALB2Q86YC2 1186 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 NT5DC4Q86YG4 428 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 GLYCTKQ8IVS8 523 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 BRSK2Q8IWQ3 736 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 BEST2Q8NFU1 509 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 SUSD3Q96L08 255 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 CLSTN3Q9BQT9 956 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 FAM213AQ9BRX8 229 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 RHOBTB2Q9BYZ6 727 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 EXOC1Q9NV70 894 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 MTRRQ9UBK8 725 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 DPP7Q9UHL4 492 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 NR2E1Q9Y466 385 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 NUB1Q9Y5A7 615 aa18.81■□□□□ 0.6
USP39-208ENST00000455732 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.8■□□□□ 0.6
USP39-208ENST00000455732 TGFB1I1O43294 461 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 ZNF202O95125 648 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 SPATA31D3P0C874 917 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 SP100P23497 879 aaPredicted RBP18.8■□□□□ 0.6
USP39-208ENST00000455732 PAX3P23760 479 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 TKTP29401 623 aaKnown RBP18.8■□□□□ 0.6
USP39-208ENST00000455732 ANP32AP39687 249 aaKnown RBP18.8■□□□□ 0.6
USP39-208ENST00000455732 AARSP49588 968 aaKnown RBP eCLIP18.8■□□□□ 0.6
USP39-208ENST00000455732 PSMD2Q13200 908 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 ELMSAN1Q6PJG2 1045 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 SPATA31D4Q6ZUB0 917 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 ANKS3Q6ZW76 656 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 FAM212AQ96EL1 285 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 SAAL1Q96ER3 474 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 PLEKHA4Q9H4M7 779 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 SLC39A2Q9NP94 309 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 BACE2Q9Y5Z0 518 aa18.8■□□□□ 0.6
USP39-208ENST00000455732 SPDYE4A6NLX3 237 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 C2CD4DB7Z1M9 353 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 I3L4J1 428 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 RFPL2O75678 378 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 FMR1NBQ8N0W7 255 aaPredicted RBP18.79■□□□□ 0.6
USP39-208ENST00000455732 GPD1LQ8N335 351 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 KIAA0895Q8NCT3 520 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 ZSWIM2Q8NEG5 633 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 CCDC34Q96HJ3 373 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 AGPAT3Q9NRZ7 376 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 RBAKQ9NYW8 714 aaPredicted RBP18.79■□□□□ 0.6
USP39-208ENST00000455732 CGNQ9P2M7 1197 aaKnown RBP18.79■□□□□ 0.6
USP39-208ENST00000455732 USTQ9Y2C2 406 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 ZNF318Q5VUA4 2279 aa18.79■□□□□ 0.6
USP39-208ENST00000455732 MUC6Q6W4X9 2439 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 CCDC195A0A1B0GUA6 201 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 ANO9A1A5B4 782 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 GOLGA6L4A6NEF3 574 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 ADAM12O43184 909 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 RPN1P04843 607 aaKnown RBP18.78■□□□□ 0.6
USP39-208ENST00000455732 PRR29P0C7W0 189 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 MCM4P33991 863 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 GUCY2FP51841 1108 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 DPYDQ12882 1025 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 STK4Q13043 487 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 KNOP1Q1ED39 458 aaKnown RBP18.78■□□□□ 0.6
USP39-208ENST00000455732 CYP26C1Q6V0L0 522 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 HS2ST1Q7LGA3 356 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 C12orf56Q8IXR9 622 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 EFCAB13Q8IY85 973 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 KREMEN2Q8NCW0 462 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 EDAQ92838 391 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 ZNF707Q96C28 371 aaPredicted RBP18.78■□□□□ 0.6
USP39-208ENST00000455732 PCIF1Q9H4Z3 704 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms