RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 DDX41Q9UJV9 622 aaKnown RBP4.36□□□□□ -1.71
RBM39-220ENST00000455343 PLA2G2DQ9UNK4 145 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 HCFC2Q9Y5Z7 792 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 CACNA1HO95180 2353 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 CDK5RAP2Q96SN8 1893 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 TMEM221A6NGB7 291 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 GSG1L2A8MUP6 293 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 LOC730098B7Z3J9 87 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 TMEM232C9JQI7 657 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 C5orf67F2Z3F1 127 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 M0R296 226 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 FFAR3O14843 346 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 EYA4O95677 639 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 TTLL1O95922 423 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 RECKO95980 971 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 MYL3P08590 195 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 CKBP12277 381 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 ALAS1P13196 640 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 NOVP48745 357 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 ALDH5A1P51649 535 aaPredicted RBP4.35□□□□□ -1.71
RBM39-220ENST00000455343 STAT2P52630 851 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 POU4F1Q01851 419 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 BAATQ14032 418 aaPredicted RBP4.35□□□□□ -1.71
RBM39-220ENST00000455343 COL9A2Q14055 689 aaPredicted RBP4.35□□□□□ -1.71
RBM39-220ENST00000455343 TCEAL1Q15170 157 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 TARBP2Q15633 366 aaKnown RBP4.35□□□□□ -1.71
RBM39-220ENST00000455343 PTGISQ16647 500 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 SKOR2Q2VWA4 1001 aaPredicted RBP4.35□□□□□ -1.71
RBM39-220ENST00000455343 BRDTQ58F21 947 aaPredicted RBP4.35□□□□□ -1.71
RBM39-220ENST00000455343 FAM47CQ5HY64 1035 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 TMCO4Q5TGY1 634 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 SLFN13Q68D06 897 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 RCSD1Q6JBY9 416 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 CEP85Q6P2H3 762 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 CCDC62Q6P9F0 684 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.35□□□□□ -1.716e-19■■■■■ 56.7
RBM39-220ENST00000455343 CCDC81Q6ZN84 652 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 LRRC8DQ7L1W4 858 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 FAM160B2Q86V87 743 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 ERC1Q8IUD2 1116 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 AMOTL1Q8IY63 956 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 DBF4BQ8NFT6 615 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 OR6J1Q8NGC5 347 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 SCFD2Q8WU76 684 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 CHURC1Q8WUH1 139 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 COPS5Q92905 334 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 TOP1MTQ969P6 601 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 CEP95Q96GE4 821 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 STRBPQ96SI9 672 aaKnown RBP4.35□□□□□ -1.71
RBM39-220ENST00000455343 HAUS7Q99871 368 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 CLDND1Q9NY35 253 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 CTDP1Q9Y5B0 961 aaPredicted RBP4.35□□□□□ -1.71
RBM39-220ENST00000455343 SLC4A4Q9Y6R1 1079 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 PLIN4Q96Q06 1357 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 ZDBF2Q9HCK1 2354 aa4.35□□□□□ -1.71
RBM39-220ENST00000455343 TECTAO75443 2155 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 PTPRZ1P23471 2315 aaPredicted RBP4.34□□□□□ -1.71
RBM39-220ENST00000455343 A0A1W2PQJ5 194 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 ZC3H12DA2A288 527 aaKnown RBP4.34□□□□□ -1.71
RBM39-220ENST00000455343 HAS3O00219 553 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 TBX10O75333 385 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 ARIH2O95376 493 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 PLA2G1BP04054 148 aaKnown RBP4.34□□□□□ -1.71
RBM39-220ENST00000455343 ICAM1P05362 532 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 RB1P06400 928 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 TXNP10599 105 aaKnown RBP4.34□□□□□ -1.71
RBM39-220ENST00000455343 ATP5JP18859 108 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 AVPR2P30518 371 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 L1CAMP32004 1257 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 SLC1A4P43007 532 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 ZXDAP98168 799 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 SIGLEC14Q08ET2 396 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 HYAL1Q12794 435 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 PAK2Q13177 524 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 ADAM15Q13444 863 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 SMAD4Q13485 552 aaKnown RBP4.34□□□□□ -1.71
RBM39-220ENST00000455343 GPM6BQ13491 265 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 CAMK1Q14012 370 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 PPP2R5DQ14738 602 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 PPP2R5BQ15173 497 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 VWA3BQ502W6 1294 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 ZNF618Q5T7W0 954 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 BTNL9Q6UXG8 535 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 NSMFQ6X4W1 530 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 ASCL5Q7RTU5 278 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 RPAINQ86UA6 219 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 ZDHHC14Q8IZN3 488 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 C19orf47Q8N9M1 422 aaKnown RBP4.34□□□□□ -1.71
RBM39-220ENST00000455343 DNERQ8NFT8 737 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 CLEC4DQ8WXI8 215 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 MSLNLQ96KJ4 702 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 DNAJC2Q99543 621 aaKnown RBP4.34□□□□□ -1.71
RBM39-220ENST00000455343 MCMBPQ9BTE3 642 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.34□□□□□ -1.71
RBM39-220ENST00000455343 RNF38Q9H0F5 515 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 KLHL25Q9H0H3 589 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 ADAM7Q9H2U9 754 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 IL1RAPL2Q9NP60 686 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 PAG1Q9NWQ8 432 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 WHRNQ9P202 907 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms