RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 LACTBL1A8MY62 500 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 TISP43B9A030 160 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 M0QZQ0 153 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 TRAPPC3O43617 180 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 ADRB2P07550 413 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 OR4Q2P0C623 313 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 CD72P21854 359 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 LRPAP1P30533 357 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 RPL9P32969 192 aaKnown RBP17.51■□□□□ 0.39
GPC1-206ENST00000455111 AARSP49588 968 aaKnown RBP eCLIP17.51■□□□□ 0.39
GPC1-206ENST00000455111 FZD5Q13467 585 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 MCM6Q14566 821 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 KARSQ15046 597 aaKnown RBP17.51■□□□□ 0.39
GPC1-206ENST00000455111 ENOX2Q16206 610 aaKnown RBP17.51■□□□□ 0.39
GPC1-206ENST00000455111 RNF19BQ6ZMZ0 732 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 LRRC3Q9BY71 257 aa17.51■□□□□ 0.39
GPC1-206ENST00000455111 DAXXQ9UER7 740 aaPredicted RBP17.51■□□□□ 0.39
GPC1-206ENST00000455111 TIMM13Q9Y5L4 95 aaPredicted RBP17.51■□□□□ 0.39
GPC1-206ENST00000455111 FRYLO94915 3013 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 STK25O00506 426 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 PIGRP01833 764 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 GJA1P17302 382 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 PLCG1P19174 1290 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 MCM4P33991 863 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 MLF2Q15773 248 aaPredicted RBP17.5■□□□□ 0.39
GPC1-206ENST00000455111 SLC44A4Q53GD3 710 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 RTL10Q7L3V2 364 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 APBB1IPQ7Z5R6 666 aaPredicted RBP17.5■□□□□ 0.39
GPC1-206ENST00000455111 ZNF687Q8N1G0 1237 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 BEST2Q8NFU1 509 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 NKD2Q969F2 451 aaPredicted RBP17.5■□□□□ 0.39
GPC1-206ENST00000455111 CORO1BQ9BR76 489 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 CYP4F11Q9HBI6 524 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 KCND2Q9NZV8 630 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 PCDHB8Q9UN66 801 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 MRPS23Q9Y3D9 190 aaKnown RBP17.5■□□□□ 0.39
GPC1-206ENST00000455111 SIT1Q9Y3P8 196 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 DMXL1Q9Y485 3027 aa17.5■□□□□ 0.39
GPC1-206ENST00000455111 ANKRD63C9JTQ0 380 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 SPTLC1O15269 473 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 CLDN3O15551 220 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 SP9P0CG40 484 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 PTPN2P17706 415 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 NMT1P30419 496 aaKnown RBP17.49■□□□□ 0.39
GPC1-206ENST00000455111 STRN3Q13033 797 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 DHX8Q14562 1220 aaKnown RBP17.49■□□□□ 0.39
GPC1-206ENST00000455111 PTPAQ15257 358 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 CTXN3Q4LDR2 81 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 SCARA3Q6AZY7 606 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 MTSS1LQ765P7 747 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 GPBP1Q86WP2 473 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 ADSSL1Q8N142 457 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 KCTD17Q8N5Z5 321 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 RSPRY1Q96DX4 576 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 TMEM209Q96SK2 561 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 DNAJC25Q9H1X3 360 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 TBX20Q9UMR3 447 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 NUB1Q9Y5A7 615 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 TCHHQ07283 1943 aa17.49■□□□□ 0.39
GPC1-206ENST00000455111 A0A0B4J269 797 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 KANSL1LA0AUZ9 987 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 H3BQV1 296 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 ECI2O75521 394 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 WNT7BP56706 349 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 ADCY1Q08828 1119 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 CUL4AQ13619 759 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
GPC1-206ENST00000455111 ZC2HC1CQ53FD0 456 aaPredicted RBP17.48■□□□□ 0.39
GPC1-206ENST00000455111 FAM78AQ5JUQ0 283 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 LARP1BQ659C4 914 aaKnown RBP17.48■□□□□ 0.39
GPC1-206ENST00000455111 TMC8Q8IU68 726 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 TTC9BQ8N6N2 239 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 RAD54LQ92698 747 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 KIF12Q96FN5 646 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 LTB4R2Q9NPC1 389 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 AFF4Q9UHB7 1163 aaKnown RBP17.48■□□□□ 0.39
GPC1-206ENST00000455111 CPSF3Q9UKF6 684 aaKnown RBP17.48■□□□□ 0.39
GPC1-206ENST00000455111 ODF2LQ9ULJ1 636 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 CLIC4Q9Y696 253 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 OBSL1O75147 1896 aa17.48■□□□□ 0.39
GPC1-206ENST00000455111 NUP210Q8TEM1 1887 aaPredicted RBP17.48■□□□□ 0.39
GPC1-206ENST00000455111 KIF26AQ9ULI4 1882 aaPredicted RBP17.48■□□□□ 0.39
GPC1-206ENST00000455111 DNAH14Q0VDD8 3507 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 ZNF292O60281 2723 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 PRRG1O14668 218 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 OAZ2O95190 189 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 LRG1P02750 347 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 NFICP08651 508 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 CLTAP09496 248 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 TARSP26639 723 aaKnown RBP17.47■□□□□ 0.39
GPC1-206ENST00000455111 SMTNP53814 917 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 EPHA5P54756 1037 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 TWF1Q12792 350 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 GRM2Q14416 872 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 TPGS2Q68CL5 300 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 ZNF280DQ6N043 979 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 FAM173BQ6P4H8 233 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 C1orf210Q8IVY1 113 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 EPSTI1Q96J88 318 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 AK8Q96MA6 479 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms