RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ABLIM1O14639 778 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SLC16A4O15374 487 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LILRB5O75023 590 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 HIP1RO75146 1068 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ECI2O75521 394 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PRAMEF12O95522 483 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CXCL8P10145 99 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CPB1P15086 417 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CYP11B2P19099 503 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CCNE1P24864 410 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MCM4P33991 863 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NPTX2P47972 431 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PXNP49023 591 aaPredicted RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FNTBP49356 437 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ADCY1Q08828 1119 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ELAVL2Q12926 359 aaKnown RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MAPK7Q13164 816 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TRIM29Q14134 588 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CTXN3Q4LDR2 81 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TTC38Q5R3I4 469 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NAIF1Q69YI7 327 aaPredicted RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SLC8B1Q6J4K2 584 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PKN3Q6P5Z2 889 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TXNDC11Q6PKC3 985 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZNF852Q6ZMS4 543 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 RNF19BQ6ZMZ0 732 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ANKS3Q6ZW76 656 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FAM177A1Q8N128 213 aaPredicted RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SHKBP1Q8TBC3 707 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZSCAN18Q8TBC5 510 aaPredicted RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SNX29Q8TEQ0 813 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 WASF1Q92558 559 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CLDN23Q96B33 292 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZBTB45Q96K62 511 aaPredicted RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FAM84AQ96KN4 292 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ASB16Q96NS5 453 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LRRC3BQ96PB8 259 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TMEM209Q96SK2 561 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PLIN2Q99541 437 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CHRDQ9H2X0 955 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZNF334Q9HCZ1 680 aaPredicted RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TUFT1Q9NNX1 390 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 DDX19AQ9NUU7 478 aaKnown RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GMEB2Q9UKD1 530 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 KCNH3Q9ULD8 1083 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 KIAA1024Q9UPX6 916 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NUB1Q9Y5A7 615 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 BACE2Q9Y5Z0 518 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZFP37Q9Y6Q3 630 aaPredicted RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NUP210Q8TEM1 1887 aaPredicted RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CACNA1EQ15878 2313 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PKD1L2Q7Z442 2459 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NPHP3-ACAD11A0A0J9YXS1 232 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 A0A1W2PRU2 124 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ARHGEF37A1IGU5 675 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SFI1A8K8P3 1242 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ARNTLO00327 626 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TBC1D4O60343 1298 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 POU2F2P09086 479 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ELF1P32519 619 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TNFSF9P41273 254 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GRM5P41594 1212 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 YARSP54577 528 aaKnown RBP6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CYP4F8P98187 520 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LMNB2Q03252 620 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TNK2Q07912 1038 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 DMP1Q13316 513 aaPredicted RBP6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SF3A2Q15428 464 aaKnown RBP6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZNF528Q3MIS6 628 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PPM1JQ5JR12 505 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TCEAL6Q6IPX3 200 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZNF280DQ6N043 979 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TMC8Q8IU68 726 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GPR65Q8IYL9 337 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TTC16Q8NEE8 873 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LRRC15Q8TF66 581 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 DNASE1L2Q92874 299 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SMARCD2Q92925 531 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TCEAL3Q969E4 200 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ELSPBP1Q96BH3 223 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 IFT74Q96LB3 600 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TBC1D32Q96NH3 1257 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NACC1Q96RE7 527 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ACO2Q99798 780 aaKnown RBP6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LPIN3Q9BQK8 851 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 POLR3CQ9BUI4 534 aaPredicted RBP6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TRMT61BQ9BVS5 477 aaKnown RBP6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CCDC94Q9BW85 323 aaPredicted RBP6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 HAPLN2Q9GZV7 340 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 DNAJC25Q9H1X3 360 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZFP14Q9HCL3 533 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ASAH2Q9NR71 780 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 RXFP3Q9NSD7 469 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GDE1Q9NZC3 331 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 EML5Q05BV3 1969 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 AKAP13Q12802 2813 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 BAHCC1Q9P281 2608 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 OBSL1O75147 1896 aa6.56□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SCN1AP35498 2009 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms