RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 KIAA1841Q6NSI8 718 aa30.26■■■□□ 2.43
SMARCC1-203ENST00000454240 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.26■■■□□ 2.43
SMARCC1-203ENST00000454240 CDCA3Q99618 268 aaPredicted RBP30.26■■■□□ 2.43
SMARCC1-203ENST00000454240 TTPALQ9BTX7 342 aa30.26■■■□□ 2.43
SMARCC1-203ENST00000454240 FRMD4BQ9Y2L6 1034 aa30.26■■■□□ 2.43
SMARCC1-203ENST00000454240 I3L4J1 428 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 C2CD2LO14523 706 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 NCK2O43639 380 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 CA8P35219 290 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 AARSP49588 968 aaKnown RBP eCLIP30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 LRRC63Q05C16 580 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 DUOXA2Q1HG44 320 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 LMBRD2Q68DH5 695 aaPredicted RBP30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 C1orf127Q8N9H9 656 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 OR5B17Q8NGF7 314 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 CXorf38Q8TB03 319 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 PLEKHO2Q8TD55 490 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 CCDC127Q96BQ5 260 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 FAM84AQ96KN4 292 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 SUSD3Q96L08 255 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 FNBP1Q96RU3 617 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 CGRRF1Q99675 332 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 TSG101Q99816 390 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 MTMR12Q9C0I1 747 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 IGFLR1Q9H665 355 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 RXFP1Q9HBX9 757 aa30.25■■■□□ 2.43
SMARCC1-203ENST00000454240 AKAP3O75969 853 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 TMEM191BP0C7N4 346 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 PAX3P23760 479 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 LILRA4P59901 499 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 SKIV2LQ15477 1246 aaKnown RBP30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 CTC1Q2NKJ3 1217 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 CEP57Q86XR8 500 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 ZC3H3Q8IXZ2 948 aaKnown RBP30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 EFHBQ8N7U6 833 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 PARD3BQ8TEW8 1205 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 RIN2Q8WYP3 895 aaPredicted RBP30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 ANKRD36BP1Q96IX9 119 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 POP1Q99575 1024 aaKnown RBP30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 ITGA11Q9UKX5 1188 aa30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 SPTBN5Q9NRC6 3674 aaKnown RBP30.24■■■□□ 2.43
SMARCC1-203ENST00000454240 TRIM49BA6NDI0 452 aa30.23■■■□□ 2.43
SMARCC1-203ENST00000454240 CNPP09543 421 aaKnown RBP30.23■■■□□ 2.43
SMARCC1-203ENST00000454240 DLATP10515 647 aaKnown RBP30.23■■■□□ 2.43
SMARCC1-203ENST00000454240 CLDN10P78369 228 aa30.23■■■□□ 2.43
SMARCC1-203ENST00000454240 ADAM15Q13444 863 aa30.23■■■□□ 2.43
SMARCC1-203ENST00000454240 LNX1Q8TBB1 728 aaPredicted RBP30.23■■■□□ 2.43
SMARCC1-203ENST00000454240 PIK3R5Q8WYR1 880 aa30.23■■■□□ 2.43
SMARCC1-203ENST00000454240 PABPC5Q96DU9 382 aaKnown RBP30.23■■■□□ 2.43
SMARCC1-203ENST00000454240 KLHL5Q96PQ7 755 aa30.23■■■□□ 2.43
SMARCC1-203ENST00000454240 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 FSD2A1L4K1 749 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 M0QZQ0 153 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 SYN3O14994 580 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 CLASP2O75122 1294 aaKnown RBP30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 ITGB3P05106 788 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 TNNI1P19237 187 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 TKTP29401 623 aaKnown RBP30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 FKBP3Q00688 224 aaKnown RBP30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 KCNC3Q14003 757 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 SCARA3Q6AZY7 606 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 FOXR2Q6PJQ5 311 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 ZNF516Q92618 1163 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 EMILIN2Q9BXX0 1053 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 FNIP2Q9P278 1114 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 SIX4Q9UIU6 781 aa30.22■■■□□ 2.43
SMARCC1-203ENST00000454240 XIRP2A4UGR9 3374 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 CETN3O15182 167 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 SPTLC1O15269 473 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 TNNC2P02585 160 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 PSMC2P35998 433 aaKnown RBP30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 MCCD1P59942 119 aaPredicted RBP30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 KLHL10Q6JEL2 608 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 PDXDC1Q6P996 788 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 RBM43Q6ZSC3 357 aaKnown RBP30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 CSGALNACT2Q8N6G5 542 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 TMC2Q8TDI7 906 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 NELFBQ8WX92 580 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 MKNK1Q9BUB5 465 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 PRDM6Q9NQX0 595 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 PCDHB8Q9UN66 801 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 AGAP1Q9UPQ3 857 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 BRWD1Q9NSI6 2320 aa30.21■■■□□ 2.43
SMARCC1-203ENST00000454240 LRRIQ3A6PVS8 624 aaPredicted RBP30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 TEX28O15482 410 aa30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 LINC01565O15544 149 aa30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 POLR2BP30876 1174 aaKnown RBP30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 TAF6P49848 677 aa30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 TTI2Q6NXR4 508 aa30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 PRSS55Q6UWB4 352 aaPredicted RBP30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 TRAPPC11Q7Z392 1133 aa30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 FAM186BQ8IYM0 893 aa30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 EEF2KMTQ96G04 330 aa30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 BORCS6Q96GS4 357 aa30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 COG5Q9UP83 839 aa30.2■■■□□ 2.43
SMARCC1-203ENST00000454240 PLXNA3P51805 1871 aa30.2■■■□□ 2.42
SMARCC1-203ENST00000454240 GLP2RO95838 553 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 LTBRP36941 435 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 DLG4P78352 724 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms