RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 DAGLBQ8NCG7 672 aa12.66□□□□□ -0.38
SEC16A-207ENST00000453963 MRPL4Q9BYD3 311 aaKnown RBP12.66□□□□□ -0.38
SEC16A-207ENST00000453963 TMEM117Q9H0C3 514 aa12.66□□□□□ -0.38
SEC16A-207ENST00000453963 SPON1Q9HCB6 807 aa12.66□□□□□ -0.38
SEC16A-207ENST00000453963 DUSP10Q9Y6W6 482 aa12.66□□□□□ -0.38
SEC16A-207ENST00000453963 SNRPAP09012 282 aaKnown RBP12.65□□□□□ -0.38
SEC16A-207ENST00000453963 GHRP10912 638 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 RARGP13631 454 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 LRRC8EQ6NSJ5 796 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 NOP9Q86U38 636 aaKnown RBP12.65□□□□□ -0.38
SEC16A-207ENST00000453963 LINC00116Q8NCU8 138 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 ANKRD27Q96NW4 1050 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 CCDC90BQ9GZT6 254 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 POLR3FQ9H1D9 316 aaPredicted RBP12.65□□□□□ -0.38
SEC16A-207ENST00000453963 MANSC1Q9H8J5 431 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 CD163L1Q9NR16 1453 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 E7ENQ6 273 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 IFNA8P32881 189 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 PTK7Q13308 1070 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 TRADDQ15628 312 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 TBCCQ15814 346 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 SWSAP1Q6NVH7 229 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 C1orf228Q6PIY5 440 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 C16orf89Q6UX73 402 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 BEST2Q8NFU1 509 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 C18orf8Q96DM3 657 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 GOLPH3Q9H4A6 298 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 DHX35Q9H5Z1 703 aaKnown RBP12.65□□□□□ -0.38
SEC16A-207ENST00000453963 NDUFA13Q9P0J0 144 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 GTF3C4Q9UKN8 822 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 PCDHB2Q9Y5E7 798 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 BNIP3LO60238 219 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 NTSR2O95665 410 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 MYL3P08590 195 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 MYBP10242 640 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 RECQLP46063 649 aaPredicted RBP12.65□□□□□ -0.38
SEC16A-207ENST00000453963 HMGCS2P54868 508 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 ITPK1Q13572 414 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 INPP5AQ14642 412 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 TEKT4Q8WW24 435 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 AGXT2Q9BYV1 514 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 PKD2L2Q9NZM6 624 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 PTPRMP28827 1452 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 SNX2O60749 519 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 SNRPFP62306 86 aaKnown RBP12.65□□□□□ -0.38
SEC16A-207ENST00000453963 DNAJC3Q13217 504 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 LRRC36Q1X8D7 754 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 SLC10A5Q5PT55 438 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 C3orf62Q6ZUJ4 267 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 SUGP1Q8IWZ8 645 aaKnown RBP12.65□□□□□ -0.38
SEC16A-207ENST00000453963 ZNF302Q9NR11 478 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 PAIP2BQ9ULR5 123 aaKnown RBP12.65□□□□□ -0.38
SEC16A-207ENST00000453963 PCDHA10Q9Y5I2 948 aa12.65□□□□□ -0.38
SEC16A-207ENST00000453963 TMEM247A6NEH6 219 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 KRT4P19013 534 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 RPA1P27694 616 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 COPB2P35606 906 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 TROAPQ12815 778 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 CCDC92Q53HC0 331 aaPredicted RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 FASTKD1Q53R41 847 aaKnown RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 ZNF677Q86XU0 584 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 ZSWIM1Q9BR11 485 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 EML4Q9HC35 981 aaKnown RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 TBC1D23Q9NUY8 699 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 XPO7Q9UIA9 1087 aaKnown RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 FLT1P17948 1338 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 ENTPD3O75355 529 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 SERPINB3P29508 390 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 CTCFP49711 727 aaPredicted RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 EFHC2Q5JST6 749 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 TWF2Q6IBS0 349 aaKnown RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 SETD3Q86TU7 594 aaPredicted RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 HIC2Q96JB3 615 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 MAGEB18Q96M61 343 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 RAB6BQ9NRW1 208 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 CNOT7Q9UIV1 285 aaKnown RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 NEK2P51955 445 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 TSPY1Q01534 308 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 CPA5Q8WXQ8 436 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 EME1Q96AY2 570 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 ADAM33Q9BZ11 813 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 FRMD8Q9BZ67 464 aaPredicted RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 KBTBD4Q9NVX7 518 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 CEP152O94986 1710 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 E9PCH4 1651 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 DLC1Q96QB1 1528 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 AP3B1O00203 1094 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 KCNN4O15554 427 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 ADCY3O60266 1144 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 SASH3O75995 380 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 SERPINB10P48595 397 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 ERFP50548 548 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 TOB1P50616 345 aaPredicted RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 FASTKD5Q7L8L6 764 aaKnown RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 MICALL2Q8IY33 904 aa12.64□□□□□ -0.39
SEC16A-207ENST00000453963 RPAP3Q9H6T3 665 aaPredicted RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 OLA1Q9NTK5 396 aaKnown RBP12.64□□□□□ -0.39
SEC16A-207ENST00000453963 WEE2P0C1S8 567 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms