RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 PPP1R2P41236 205 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 CLCN4P51793 760 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 GUCY2FP51841 1108 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 POU5F1Q01860 360 aaKnown RBP15.89■□□□□ 0.13
VPS16-205ENST00000453689 KNOP1Q1ED39 458 aaKnown RBP15.89■□□□□ 0.13
VPS16-205ENST00000453689 ISM2Q6H9L7 571 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 SYCE2Q6PIF2 218 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 PRSS55Q6UWB4 352 aaPredicted RBP15.89■□□□□ 0.13
VPS16-205ENST00000453689 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.89■□□□□ 0.13
VPS16-205ENST00000453689 PPFIBP1Q86W92 1011 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 NELFCDQ8IXH7 590 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 PIK3R5Q8WYR1 880 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 NECAB3Q96P71 396 aaPredicted RBP15.89■□□□□ 0.13
VPS16-205ENST00000453689 TSPAN18Q96SJ8 248 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 TTPALQ9BTX7 342 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 ASB7Q9H672 318 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.89■□□□□ 0.13
VPS16-205ENST00000453689 FNIP2Q9P278 1114 aa15.89■□□□□ 0.13
VPS16-205ENST00000453689 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.89■□□□□ 0.13
VPS16-205ENST00000453689 GOLGA8IPA6NC78 632 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 GOLGA8JA6NMD2 632 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 DLL1O00548 723 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 TGFB1I1O43294 461 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 TRAPPC3O43617 180 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 LETM1O95202 739 aaPredicted RBP15.88■□□□□ 0.13
VPS16-205ENST00000453689 ADH1AP07327 375 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 RPL17P18621 184 aaKnown RBP15.88■□□□□ 0.13
VPS16-205ENST00000453689 CYP3A5P20815 502 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 BMP6P22004 513 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 FGFR3P22607 806 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 WNT7BP56706 349 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 STIM1Q13586 685 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 TMEM132DQ14C87 1099 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 SPATA1Q5VX52 437 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 GLYCTKQ8IVS8 523 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 BRSK2Q8IWQ3 736 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 UHRF1Q96T88 793 aaPredicted RBP15.88■□□□□ 0.13
VPS16-205ENST00000453689 APOL5Q9BWW9 433 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 FAM50BQ9Y247 325 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 DERAQ9Y315 318 aa15.88■□□□□ 0.13
VPS16-205ENST00000453689 A0A0C4DFX4 3053 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 KIAA0391O15091 583 aaKnown RBP15.87■□□□□ 0.13
VPS16-205ENST00000453689 EXTL3O43909 919 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 IL18RAPO95256 599 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 HOXB8P17481 243 aaPredicted RBP15.87■□□□□ 0.13
VPS16-205ENST00000453689 TKTP29401 623 aaKnown RBP15.87■□□□□ 0.13
VPS16-205ENST00000453689 PRCPP42785 496 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 CREMQ03060 361 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 SMAD2Q15796 467 aaKnown RBP15.87■□□□□ 0.13
VPS16-205ENST00000453689 PSMD5Q16401 504 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 SASS6Q6UVJ0 657 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 HS2ST1Q7LGA3 356 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 EFCAB13Q8IY85 973 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 ADSSL1Q8N142 457 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 GPD1LQ8N335 351 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 BEST2Q8NFU1 509 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 GOLGA5Q8TBA6 731 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 LNX1Q8TBB1 728 aaPredicted RBP15.87■□□□□ 0.13
VPS16-205ENST00000453689 NOC3LQ8WTT2 800 aaKnown RBP15.87■□□□□ 0.13
VPS16-205ENST00000453689 S1PR5Q9H228 398 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 DZANK1Q9NVP4 752 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 RBAKQ9NYW8 714 aaPredicted RBP15.87■□□□□ 0.13
VPS16-205ENST00000453689 HSPBP1Q9NZL4 362 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 MAPK8IP1Q9UQF2 711 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 C2CD2Q9Y426 696 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 USP15Q9Y4E8 981 aaPredicted RBP15.87■□□□□ 0.13
VPS16-205ENST00000453689 NUB1Q9Y5A7 615 aa15.87■□□□□ 0.13
VPS16-205ENST00000453689 PSMA7O14818 248 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 PPEF2O14830 753 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 NLRP12P59046 1061 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 SNRPFP62306 86 aaKnown RBP15.86■□□□□ 0.13
VPS16-205ENST00000453689 PDXDC1Q6P996 788 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 PALB2Q86YC2 1186 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 C12orf76Q8N812 135 aaPredicted RBP15.86■□□□□ 0.13
VPS16-205ENST00000453689 MLKLQ8NB16 471 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 SUSD3Q96L08 255 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 FBXL18Q96ME1 805 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 CLSTN3Q9BQT9 956 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 KCTD10Q9H3F6 313 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 AGPAT3Q9NRZ7 376 aa15.86■□□□□ 0.13
VPS16-205ENST00000453689 CGNQ9P2M7 1197 aaKnown RBP15.86■□□□□ 0.13
VPS16-205ENST00000453689 PPP1R3GB7ZBB8 358 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 PDXKO00764 312 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 CLIC2O15247 247 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 GLUD1P00367 558 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 CD44P16070 742 aaKnown RBP15.85■□□□□ 0.13
VPS16-205ENST00000453689 RARS2Q5T160 578 aaKnown RBP15.85■□□□□ 0.13
VPS16-205ENST00000453689 C9orf57Q5W0N0 161 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 ANKS3Q6ZW76 656 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 NT5DC4Q86YG4 428 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 SUSD6Q92537 303 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 MAN1C1Q9NR34 630 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 MTRRQ9UBK8 725 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 DACH1Q9UI36 760 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 CDH22Q9UJ99 828 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 NOTCH4Q99466 2003 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 MYO10Q9HD67 2058 aa15.85■□□□□ 0.13
VPS16-205ENST00000453689 DOCK8Q8NF50 2099 aa15.84■□□□□ 0.13
VPS16-205ENST00000453689 ANO9A1A5B4 782 aa15.84■□□□□ 0.13
VPS16-205ENST00000453689 SYN3O14994 580 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms