RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 FOSL2P15408 326 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 PNPLA4P41247 253 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 ERVFC1P60507 584 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 DLG4P78352 724 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 CLDN10P78369 228 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 SMC1AQ14683 1233 aaKnown RBP15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 DSTYKQ6XUX3 929 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 TAS1R1Q7RTX1 841 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 TRAPPC11Q7Z392 1133 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 FRMD5Q7Z6J6 570 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 CEP57Q86XR8 500 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 CREBRFQ8IUR6 639 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 C1orf127Q8N9H9 656 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 C3orf58Q8NDZ4 430 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 OR5B17Q8NGF7 314 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 PLEKHO2Q8TD55 490 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 ZNF516Q92618 1163 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 ZNF560Q96MR9 790 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 TCF25Q9BQ70 676 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 HERC2P3Q9BVR0 1158 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 MRPL17Q9NRX2 175 aaKnown RBP15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 ARMCX3Q9UH62 379 aaPredicted RBP15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 MTCH2Q9Y6C9 303 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 PDCD11Q14690 1871 aaKnown RBP15.77■□□□□ 0.11
NCKIPSD-207ENST00000453349 ANK1P16157 1881 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 PLXNA4Q9HCM2 1894 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 EFEMP2O95967 443 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 CTSAP10619 480 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 POLR2BP30876 1174 aaKnown RBP15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 BRCC3P46736 316 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 TAF6P49848 677 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 LILRA4P59901 499 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 TYRO3Q06418 890 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 MYO1EQ12965 1108 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 BIRC3Q13489 604 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 TRPC3Q13507 836 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 CAMK1Q14012 370 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 ADGRE1Q14246 886 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 SV2CQ496J9 727 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 FAM171A1Q5VUB5 890 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 PLPP4Q5VZY2 271 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 CD300LGQ6UXG3 332 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 TMEM130Q8N3G9 435 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 PPP2R3CQ969Q6 453 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 BORCS6Q96GS4 357 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 NAT10Q9H0A0 1025 aaKnown RBP15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 ZBP1Q9H171 429 aa15.76■□□□□ 0.11
NCKIPSD-207ENST00000453349 PTPRJQ12913 1337 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 ARHGEF37A1IGU5 675 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 FSCN2O14926 492 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 C4BPAP04003 597 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 URODP06132 367 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 IGFBP6P24592 240 aaPredicted RBP15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 GTF2H1P32780 548 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 GLUD2P49448 558 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 MCCD1P59942 119 aaPredicted RBP15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 TIGD5Q53EQ6 642 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 TCERG1LQ5VWI1 586 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 PDXDC1Q6P996 788 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 RNF168Q8IYW5 571 aaPredicted RBP15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 LRRC52Q8N7C0 313 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 MRPL43Q8N983 215 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 ENOX1Q8TC92 643 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 SUSD3Q96L08 255 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 TTPALQ9BTX7 342 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 VN1R3Q9BXE9 311 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 GZF1Q9H116 711 aaPredicted RBP15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 NSUN3Q9H649 340 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 CHST7Q9NS84 486 aa15.75■□□□□ 0.11
NCKIPSD-207ENST00000453349 COL4A4P53420 1690 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 SYCE3A1L190 88 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 KPNA7A9QM74 516 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 I3L4J1 428 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 C2CD2LO14523 706 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 PPEF2O14830 753 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 CST3P01034 146 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 IRS1P35568 1242 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 DSG1Q02413 1049 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 DCAF17Q5H9S7 520 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 KIAA0319Q5VV43 1072 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 FAM114A1Q8IWE2 563 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 GPR65Q8IYL9 337 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 MICALL1Q8N3F8 863 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 APPL2Q8NEU8 664 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 RIN2Q8WYP3 895 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 MED15Q96RN5 788 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 EMILIN2Q9BXX0 1053 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 THAP9Q9H5L6 903 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 MMRN2Q9H8L6 949 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 MAGEC2Q9UBF1 373 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 SIX4Q9UIU6 781 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 PCDHB8Q9UN66 801 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 IRAK3Q9Y616 596 aa15.74■□□□□ 0.11
NCKIPSD-207ENST00000453349 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 M0QZQ0 153 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 SYN3O14994 580 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 TRIM49P0CI25 452 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 TRIM49CP0CI26 452 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 FGFR3P22607 806 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms