RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 GOLGA6CA6NDK9 693 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 ACKR2O00590 384 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 GH1P01241 217 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 GOLGA6DP0CG33 693 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 CAPN2P17655 700 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 BRD2P25440 801 aaKnown RBP12.57□□□□□ -0.4
VTA1-203ENST00000452973 KCNJ1P48048 391 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 TMEM62Q0P6H9 643 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 ZFYVE27Q5T4F4 411 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 WDR49Q8IV35 697 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 EFCAB13Q8IY85 973 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 ARL8AQ96BM9 186 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 FAM81BQ96LP2 452 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 JPH2Q9BR39 696 aaPredicted RBP12.57□□□□□ -0.4
VTA1-203ENST00000452973 GOLGA6AQ9NYA3 693 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 DIS3Q9Y2L1 958 aaKnown RBP12.57□□□□□ -0.4
VTA1-203ENST00000452973 MROH7Q68CQ1 1323 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 GAS2O43903 313 aaKnown RBP12.57□□□□□ -0.4
VTA1-203ENST00000452973 C22orf31O95567 290 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 TBXAS1P24557 533 aaPredicted RBP12.57□□□□□ -0.4
VTA1-203ENST00000452973 SLC26A2P50443 739 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 MCL1Q07820 350 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 LAMC2Q13753 1193 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 ZNF699Q32M78 642 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 ZNF792Q3KQV3 632 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 ZDHHC14Q8IZN3 488 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 ABRAQ8N0Z2 381 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 OR2W6PQ8NHA6 318 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 NLRP7Q8WX94 980 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 ZNF606Q8WXB4 792 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 GPR25O00155 361 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 CELF2O95319 508 aaKnown RBP12.56□□□□□ -0.4
VTA1-203ENST00000452973 ASS1P00966 412 aaKnown RBP12.56□□□□□ -0.4
VTA1-203ENST00000452973 FGFR4P22455 802 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 RAP1GAPP47736 663 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 GTF2A2P52657 109 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 RWDD2BP57060 319 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 PTENP60484 403 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 MBTD1Q05BQ5 628 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 SNX1Q13596 522 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 EXOC8Q8IYI6 725 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 SHCBP1Q8NEM2 672 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 WHAMMQ8TF30 809 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 UBLCP1Q8WVY7 318 aaPredicted RBP12.56□□□□□ -0.4
VTA1-203ENST00000452973 CDT1Q9H211 546 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 CISHQ9NSE2 258 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 POLIQ9UNA4 740 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 SNX24Q9Y343 169 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 CCDC66A2RUB6 948 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 H3BRB1 525 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 O00370 1275 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 ABLIM1O14639 778 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 TMOD1P28289 359 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 ECHS1P30084 290 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 PRAMEF19Q5SWL8 479 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 TTC19Q6DKK2 380 aaPredicted RBP12.56□□□□□ -0.4
VTA1-203ENST00000452973 DPH6Q7L8W6 267 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 GPR142Q7Z601 462 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 CCDC50Q8IVM0 306 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 CCDC105Q8IYK2 499 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 SH2D3CQ8N5H7 860 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 PRELID2Q8N945 189 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 EXOC4Q96A65 974 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 TUT1Q9H6E5 874 aaKnown RBP12.56□□□□□ -0.4
VTA1-203ENST00000452973 RPF1Q9H9Y2 349 aaKnown RBP12.56□□□□□ -0.4
VTA1-203ENST00000452973 IFT122Q9HBG6 1241 aa12.56□□□□□ -0.4
VTA1-203ENST00000452973 TTC7AQ9ULT0 858 aaPredicted RBP12.56□□□□□ -0.4
VTA1-203ENST00000452973 MTA2O94776 668 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 SNAI1O95863 264 aaPredicted RBP12.55□□□□□ -0.4
VTA1-203ENST00000452973 TNNC2P02585 160 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 HOXC6P09630 235 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 CD19P15391 556 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 CDH8P55286 799 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 ENPEPQ07075 957 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 CUL1Q13616 776 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 WDR72Q3MJ13 1102 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 LIN9Q5TKA1 542 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 CCDC137Q6PK04 289 aaKnown RBP12.55□□□□□ -0.4
VTA1-203ENST00000452973 TSHZ1Q6ZSZ6 1077 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 C1orf54Q8WWF1 131 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 CD101Q93033 1021 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 ANKRD36BP1Q96IX9 119 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 HEMGNQ9BXL5 484 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 FZD8Q9H461 694 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 GBA2Q9HCG7 927 aaPredicted RBP12.55□□□□□ -0.4
VTA1-203ENST00000452973 PCDHA3Q9Y5H8 950 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 NFICP08651 508 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 CTNNA1P35221 906 aaKnown RBP12.55□□□□□ -0.4
VTA1-203ENST00000452973 PHKA2P46019 1235 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 PLTPP55058 493 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 NOMO3P69849 1222 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 CENPCQ03188 943 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 SGSM1Q2NKQ1 1148 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 C1orf131Q8NDD1 294 aaKnown RBP12.55□□□□□ -0.4
VTA1-203ENST00000452973 MORC4Q8TE76 937 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 FAM118BQ9BPY3 351 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 FAM49AQ9H0Q0 323 aaPredicted RBP12.55□□□□□ -0.4
VTA1-203ENST00000452973 KLHL11Q9NVR0 708 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 PLAAQ9Y263 795 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms