RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 USP38Q8NB14 1042 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 SHCBP1Q8NEM2 672 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 IFT43Q96FT9 208 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 DCUN1D1Q96GG9 259 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 SLC25A13Q9UJS0 675 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 SH3BP1Q9Y3L3 701 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 PHF20L1A8MW92 1017 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 PCYT1AP49585 367 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 TUBGCP4Q9UGJ1 667 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 FAM196BA6NMK8 535 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 MEI4A8MW99 385 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ADCY6O43306 1168 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 KATNA1O75449 491 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ITGA4P13612 1032 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 NR2F2P24468 414 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 RAP1GDS1P52306 607 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 PKP1Q13835 747 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 GRM4Q14833 912 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 HP1BP3Q5SSJ5 553 aaPredicted RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 PPM1KQ8N3J5 372 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 AADATQ8N5Z0 425 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 NRBP1Q9UHY1 535 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 SMG5Q9UPR3 1016 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 ZSCAN23Q3MJ62 389 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 RARS2Q5T160 578 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 CCDC105Q8IYK2 499 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ZNF248Q8NDW4 579 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 TBC1D16Q8TBP0 767 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 NELFBQ8WX92 580 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ASIC4Q96FT7 647 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 CARD9Q9H257 536 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 KIAA1024Q9UPX6 916 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ZNF609O15014 1411 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 PHRF1Q9P1Y6 1649 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 CCDC162PA2VCL2 907 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 MYO1FO00160 1098 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 GADD45BO75293 160 aaPredicted RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 KRT6AP02538 564 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 KRT6BP04259 564 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 RHOXF2BP0C7M4 288 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 CYP2C8P10632 490 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 MAPK8P45983 427 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ITGADQ13349 1161 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ADAM9Q13443 819 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 HECTD3Q5T447 861 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 LRRC8EQ6NSJ5 796 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 LUZP2Q86TE4 346 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 C1orf131Q8NDD1 294 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 GPKOWQ92917 476 aaPredicted RBP eCLIP3.78□□□□□ -1.86e-6■■□□□ 12
ATM-203ENST00000452508 RHOXF2Q9BQY4 288 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 AP1M1Q9BXS5 423 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 TMEM60Q9H2L4 133 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 WDR35Q9P2L0 1181 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 CICQ96RK0 1608 aaPredicted RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 SALL1Q9NSC2 1324 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 PNMA8CA0A1B0GUJ8 204 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 WTIPA6NIX2 430 aaPredicted RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 HBP1O60381 514 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ERN1O75460 977 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 ITGA10O75578 1167 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ICAM1P05362 532 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 SLC2A4P14672 509 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 CPA3P15088 417 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ACTN3Q08043 901 aaPredicted RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 SCRN1Q12765 414 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 DNAL1Q4LDG9 190 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 SGO2Q562F6 1265 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 TDRD10Q5VZ19 366 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 PCNX4Q63HM2 1172 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 CRELD2Q6UXH1 353 aaPredicted RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 DDX53Q86TM3 631 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 CDH24Q86UP0 819 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 HEXIM2Q96MH2 286 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 TMEM39AQ9NV64 488 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ASNSD1Q9NWL6 643 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 O00370 1275 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 POLR2DO15514 142 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 BRD1O95696 1058 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 PDIA3P30101 505 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 TGM3Q08188 693 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 NFX1Q12986 1120 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 ZNF235Q14590 738 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 CYB5R4Q7L1T6 521 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ZNF579Q8NAF0 562 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 TMIEQ8NEW7 156 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 SAAL1Q96ER3 474 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 PACSIN1Q9BY11 444 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 ZWILCHQ9H900 591 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 PIN4Q9Y237 131 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 ZNF510Q9Y2H8 683 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 SAR1BQ9Y6B6 198 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 KRT87PA6NCN2 255 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 BIRC5O15392 142 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 SLC16A3O15427 465 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 MAGEC1O60732 1142 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 RTN3O95197 1032 aaPredicted RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 AFPP02771 609 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 RPN1P04843 607 aaKnown RBP3.78□□□□□ -1.8
ATM-203ENST00000452508 RENBPP51606 427 aa3.78□□□□□ -1.8
ATM-203ENST00000452508 NUP107P57740 925 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms