RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 PTPROQ16827 1216 aa15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 ANO6Q4KMQ2 910 aa15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 DCAF17Q5H9S7 520 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 C9orf57Q5W0N0 161 aa15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 FUT10Q6P4F1 479 aa15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 DDX53Q86TM3 631 aaKnown RBP15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 RNF168Q8IYW5 571 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 LRRC52Q8N7C0 313 aa15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 C3orf58Q8NDZ4 430 aa15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 HERC2P3Q9BVR0 1158 aa15.74■□□□□ 0.11
TRAPPC12-211ENST00000452495 TADA2AO75478 443 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 TRIM49P0CI25 452 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 TRIM49CP0CI26 452 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 DLG4P78352 724 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 RBP5P82980 135 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 SV2CQ496J9 727 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 C1orf220Q5T0J3 134 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 LMBRD2Q68DH5 695 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 PDE12Q6L8Q7 609 aaKnown RBP15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 TRAPPC11Q7Z392 1133 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 SPPL3Q8TCT6 385 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 RABGGTAQ92696 567 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 CNOT6LQ96LI5 555 aaKnown RBP15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 POP1Q99575 1024 aaKnown RBP15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 TLR9Q9NR96 1032 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 R3HCC1Q9Y3T6 440 aaKnown RBP15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 NFE2L3Q9Y4A8 694 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 NUB1Q9Y5A7 615 aa15.73■□□□□ 0.11
TRAPPC12-211ENST00000452495 ARHGEF37A1IGU5 675 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 F8W810 466 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 GRM6O15303 877 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 LPXNO60711 386 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 SOD2P04179 222 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 POLR2BP30876 1174 aaKnown RBP15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 AARSP49588 968 aaKnown RBP eCLIP15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 TAF6P49848 677 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 BIRC3Q13489 604 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 BMS1Q14692 1282 aaKnown RBP15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 GRIN2CQ14957 1233 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 ZACNQ401N2 412 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 TCERG1LQ5VWI1 586 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 TDRD10Q5VZ19 366 aaKnown RBP15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 CD300LGQ6UXG3 332 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 C15orf39Q6ZRI6 1047 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 TRIM59Q8IWR1 403 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 CXorf38Q8TB03 319 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 HASPINQ8TF76 798 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 POF1BQ8WVV4 589 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 ZNF516Q92618 1163 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 SLC35C1Q96A29 364 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 VN1R3Q9BXE9 311 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 ZBP1Q9H171 429 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 PRDM12Q9H4Q4 367 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 TMEM8AQ9HCN3 771 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 ALG13Q9NP73 1137 aaKnown RBP15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 LMCD1Q9NZU5 365 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 MAGEC2Q9UBF1 373 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 SIX4Q9UIU6 781 aa15.72■□□□□ 0.11
TRAPPC12-211ENST00000452495 PLXNA3P51805 1871 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 MTCL1Q9Y4B5 1905 aaKnown RBP15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 PPEF2O14830 753 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 N4BP1O75113 896 aaKnown RBP15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 STAU1O95793 577 aaKnown RBP15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 C4BPAP04003 597 aaKnown RBP15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 KRT19P08727 400 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 ZNF165P49910 485 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 MXI1P50539 228 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 MYO1EQ12965 1108 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 KRT39Q6A163 491 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 GPR65Q8IYL9 337 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 VPS52Q8N1B4 723 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 DEFB123Q8N688 67 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 MRPL38Q96DV4 380 aaKnown RBP15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 SUSD3Q96L08 255 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 GAS2L1Q99501 681 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 AGAP1Q9UPQ3 857 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 SSX2IPQ9Y2D8 614 aa15.71■□□□□ 0.11
TRAPPC12-211ENST00000452495 M0QZQ0 153 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 FSCN2O14926 492 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 SYN3O14994 580 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 PHACTR2O75167 634 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 URODP06132 367 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 CTSAP10619 480 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 POU3F3P20264 500 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 DNAJB1P25685 340 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 EEF1GP26641 437 aaKnown RBP15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 ATICP31939 592 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 PIK3CAP42336 1068 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 GLUD2P49448 558 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 LILRA4P59901 499 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 CREMQ03060 361 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 PPP3CAQ08209 521 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 TRPC3Q13507 836 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 SMC1AQ14683 1233 aaKnown RBP15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 USP41Q3LFD5 358 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 TIGD5Q53EQ6 642 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 CDKAL1Q5VV42 579 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 PDXDC1Q6P996 788 aa15.7■□□□□ 0.1
TRAPPC12-211ENST00000452495 SV2AQ7L0J3 742 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms