RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 EXTL3O43909 919 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 GLUD1P00367 558 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 MYL1P05976 194 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 CA8P35219 290 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 STK4Q13043 487 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 SNW1Q13573 536 aaKnown RBP17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 RARS2Q5T160 578 aaKnown RBP17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 C9orf57Q5W0N0 161 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 SLC8B1Q6J4K2 584 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 PDXDC1Q6P996 788 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 CEP57Q86XR8 500 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 BRSK2Q8IWQ3 736 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 CEP57L1Q8IYX8 460 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 FMR1NBQ8N0W7 255 aaPredicted RBP17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 FSIP1Q8NA03 581 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 KIAA0895Q8NCT3 520 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 TMEM174Q8WUU8 243 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 FAM213AQ9BRX8 229 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 POMKQ9H5K3 350 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 MAN1C1Q9NR34 630 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 FBXW11Q9UKB1 542 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 PDCD11Q14690 1871 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 ZNF202O95125 648 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 OAZ2O95190 189 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 WEE2P0C1S8 567 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 SPATA31D3P0C874 917 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 LILRA4P59901 499 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 SNRPFP62306 86 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 DPYDQ12882 1025 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 KMT5BQ4FZB7 885 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 VARS2Q5ST30 1063 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 TMC5Q6UXY8 1006 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 CYP26C1Q6V0L0 522 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 KRBA2Q6ZNG9 492 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 C15orf39Q6ZRI6 1047 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 SPATA31D4Q6ZUB0 917 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 ANKS3Q6ZW76 656 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 C12orf56Q8IXR9 622 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 TMEM87AQ8NBN3 555 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 SAAL1Q96ER3 474 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 GZF1Q9H116 711 aaPredicted RBP17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 SFXN1Q9H9B4 322 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 SLC39A2Q9NP94 309 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 AGPAT3Q9NRZ7 376 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 PCDHB8Q9UN66 801 aa17.48■□□□□ 0.39
SCAMP4-205ENST00000452128 UBE4BO95155 1302 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 KIAA0391O15091 583 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 RFPL2O75678 378 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 ABLIM3O94929 683 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 IL18RAPO95256 599 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 LDHAP00338 332 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 PRR29P0C7W0 189 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 OR1D2P34982 312 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 MTHFRP42898 656 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 TMEM132DQ14C87 1099 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 STXBP4Q6ZWJ1 553 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 NT5DC4Q86YG4 428 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 SYCP3Q8IZU3 236 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 KREMEN2Q8NCW0 462 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 NECTIN4Q96NY8 510 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 EPHX3Q9H6B9 360 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 DMAC2Q9NW81 257 aa17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
SCAMP4-205ENST00000452128 GOLGA8IPA6NC78 632 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 GOLGA8JA6NMD2 632 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 XPOTO43592 962 aaKnown RBP17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 ZMYND10O75800 440 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 PAX3P23760 479 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 PSMD2Q13200 908 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 ATAT1Q5SQI0 421 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 CES5AQ6NT32 575 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 CBWD2Q8IUF1 395 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 BEST2Q8NFU1 509 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 FAM212AQ96EL1 285 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 POP1Q99575 1024 aaKnown RBP17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 KCTD10Q9H3F6 313 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 ZDHHC7Q9NXF8 308 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 HSPBP1Q9NZL4 362 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 FBXL5Q9UKA1 691 aa17.46■□□□□ 0.39
SCAMP4-205ENST00000452128 PLXNA3P51805 1871 aa17.46■□□□□ 0.38
SCAMP4-205ENST00000452128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 CCDC195A0A1B0GUA6 201 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 RHOBTB3O94955 611 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 POU2F2P09086 479 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 KNOP1Q1ED39 458 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 ARMCX5Q6P1M9 558 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 RNF135Q8IUD6 432 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 GLYCTKQ8IVS8 523 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 GPD1LQ8N335 351 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 C1orf127Q8N9H9 656 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 FAM84AQ96KN4 292 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 RIPOR3Q96MK2 946 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 PRKD2Q9BZL6 878 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 PDE11AQ9HCR9 933 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 C11orf16Q9NQ32 467 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 DPP3Q9NY33 737 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 RBAKQ9NYW8 714 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 DPP7Q9UHL4 492 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 NUB1Q9Y5A7 615 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms