RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TBX20Q9UMR3 447 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 PCDHA5Q9Y5H7 936 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 TRIOO75962 3097 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 DOCK6Q96HP0 2047 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 PODXLO00592 558 aa18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 RPN1P04843 607 aaKnown RBP18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 CXCL8P10145 99 aa18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 FGFR3P22607 806 aa18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 TKTP29401 623 aaKnown RBP18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 TNFSF9P41273 254 aa18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 CMASQ8NFW8 434 aaPredicted RBP18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 PBXIP1Q96AQ6 731 aa18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 ZNF707Q96C28 371 aaPredicted RBP18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 PLEKHA4Q9H4M7 779 aa18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 PIDD1Q9HB75 910 aa18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 SLC38A7Q9NVC3 462 aa18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 SEL1LQ9UBV2 794 aa18.53■□□□□ 0.56
PRPF40A-204ENST00000450303 HNRNPDLO14979 420 aaKnown RBP18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 CASP1P29466 404 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 OR1D2P34982 312 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 ZNF445P59923 1031 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 SIGLEC14Q08ET2 396 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 PSMD2Q13200 908 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 KCNB1Q14721 858 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 ZC2HC1CQ53FD0 456 aaPredicted RBP18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 ZBTB41Q5SVQ8 909 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 SASS6Q6UVJ0 657 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 RSPO2Q6UXX9 243 aaPredicted RBP18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 ZDHHC14Q8IZN3 488 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 PLCD3Q8N3E9 789 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 HDAC7Q8WUI4 952 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 ANP32BQ92688 251 aaKnown RBP18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 ACSF2Q96CM8 615 aaPredicted RBP18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 DDX27Q96GQ7 796 aaKnown RBP18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 FIZ1Q96SL8 496 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 GRPEL1Q9HAV7 217 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 USTQ9Y2C2 406 aa18.52■□□□□ 0.56
PRPF40A-204ENST00000450303 TRAPPC3O43617 180 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 ZMYND10O75800 440 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 KMT5BQ4FZB7 885 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 RBM43Q6ZSC3 357 aaKnown RBP18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 OTOP3Q7RTS5 596 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 TRIML1Q8N9V2 468 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 PRKD2Q9BZL6 878 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 IKZF4Q9H2S9 585 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 WDR6Q9NNW5 1121 aaKnown RBP18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 TUBGCP4Q9UGJ1 667 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 FBXW11Q9UKB1 542 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 SORCS3Q9UPU3 1222 aa18.51■□□□□ 0.55
PRPF40A-204ENST00000450303 FRMD3A2A2Y4 597 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 LACTBL1A8MY62 500 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 TISP43B9A030 160 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 ANKRD63C9JTQ0 380 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 N4BP1O75113 896 aaKnown RBP18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 RHOBTB3O94955 611 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 C1RP00736 705 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 PIGRP01833 764 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 CLTAP09496 248 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 GBP2P32456 591 aaPredicted RBP18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 ABCD1P33897 745 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 SLC39A4Q6P5W5 647 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 PDXDC1Q6P996 788 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 STXBP4Q6ZWJ1 553 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 SFR1Q86XK3 245 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 SPATA20Q8TB22 786 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 ERCC4Q92889 916 aaPredicted RBP18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 FAM212AQ96EL1 285 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 KIF12Q96FN5 646 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 ASIC4Q96FT7 647 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 MFSD14AQ96MC6 490 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 ZDHHC7Q9NXF8 308 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 TBC1D7Q9P0N9 293 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 MTRRQ9UBK8 725 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 NUB1Q9Y5A7 615 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 CDY1Q9Y6F8 540 aa18.5■□□□□ 0.55
PRPF40A-204ENST00000450303 CLUHO75153 1309 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 TTC26A0AVF1 554 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 KLRC4O43908 158 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 SCP2P22307 547 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 RPL9P32969 192 aaKnown RBP18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 GUCY2FP51841 1108 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 GTF2BQ00403 316 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 MTMR3Q13615 1198 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 RAB33AQ14088 237 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 ZSCAN23Q3MJ62 389 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 PPM1LQ5SGD2 360 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 LIN9Q5TKA1 542 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 CYP26C1Q6V0L0 522 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 BMP8AQ7Z5Y6 402 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 KCNN1Q92952 543 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 FAM122AQ96E09 287 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 MSTO1Q9BUK6 570 aa18.49■□□□□ 0.55
PRPF40A-204ENST00000450303 A0A0B4J269 797 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 OGTO15294 1046 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 CCL16O15467 120 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 FAM189A1O60320 539 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 KIF20AO95235 890 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 PDGFBP01127 241 aaPredicted RBP18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 C8AP07357 584 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 ARPP19P56211 112 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms