RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 INTS6LQ5JSJ4 861 aaKnown RBP8.83□□□□□ -1
LINC01961-201ENST00000449954 RTP2Q5QGT7 225 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 PRSS55Q6UWB4 352 aaPredicted RBP8.83□□□□□ -1
LINC01961-201ENST00000449954 NIPA1Q7RTP0 329 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 ZNF589Q86UQ0 364 aaPredicted RBP8.83□□□□□ -1
LINC01961-201ENST00000449954 TEX2Q8IWB9 1127 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 MFSD6LQ8IWD5 586 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 ADAMTS14Q8WXS8 1223 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 EVI5LQ96CN4 794 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 FAM227BQ96M60 508 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 CLSTN3Q9BQT9 956 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 TTPALQ9BTX7 342 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 NUSAP1Q9BXS6 441 aaKnown RBP8.83□□□□□ -1
LINC01961-201ENST00000449954 TRPV4Q9HBA0 871 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 COL12A1Q99715 3063 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 A0A087WZ62 844 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 WDR27A2RRH5 827 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 ARL5CA6NH57 179 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 SLC38A8A6NNN8 435 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 F8W810 466 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 MEIS1O00470 390 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 CHADO15335 359 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 PSAPP07602 524 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 PTPN2P17706 415 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 HOXC13P31276 330 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 GBP1P32455 592 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 MLH1P40692 756 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 DNM2P50570 870 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 IRX4P78413 519 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 SRSF1Q07955 248 aaKnown RBP eCLIP8.82□□□□□ -1
LINC01961-201ENST00000449954 RAB33AQ14088 237 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 UBE2SQ16763 222 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 PRSS36Q5K4E3 855 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 PMS2CLQ68D20 193 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 ZNF746Q6NUN9 644 aaPredicted RBP8.82□□□□□ -1
LINC01961-201ENST00000449954 TXNDC11Q6PKC3 985 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 TRMT1LQ7Z2T5 733 aaKnown RBP8.82□□□□□ -1
LINC01961-201ENST00000449954 YAF2Q8IY57 180 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 HDDC3Q8N4P3 179 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 PIBF1Q8WXW3 757 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 FDXACB1Q9BRP7 624 aaPredicted RBP8.82□□□□□ -1
LINC01961-201ENST00000449954 SHROOM3Q8TF72 1996 aa8.82□□□□□ -1
LINC01961-201ENST00000449954 TDRD15B5MCY1 1934 aaKnown RBP8.82□□□□□ -1
LINC01961-201ENST00000449954 TEP1Q99973 2627 aaKnown RBP8.81□□□□□ -1
LINC01961-201ENST00000449954 PATE3B3GLJ2 98 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 MEFVO15553 781 aaPredicted RBP8.81□□□□□ -1
LINC01961-201ENST00000449954 TADA2AO75478 443 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 LRG1P02750 347 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 ITGA4P13612 1032 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 MX1P20591 662 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 SMARCA1P28370 1054 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 DPP6P42658 865 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 SPIRE1Q08AE8 756 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 FCHO2Q0JRZ9 810 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 PON2Q15165 354 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 IMMTQ16891 758 aaKnown RBP8.81□□□□□ -1
LINC01961-201ENST00000449954 PDZD4Q76G19 769 aaPredicted RBP8.81□□□□□ -1
LINC01961-201ENST00000449954 LNX1Q8TBB1 728 aaPredicted RBP8.81□□□□□ -1
LINC01961-201ENST00000449954 NRBP2Q9NSY0 501 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 EBF1Q9UH73 591 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 PCDHA10Q9Y5I2 948 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 ZMYM2Q9UBW7 1377 aa8.81□□□□□ -1
LINC01961-201ENST00000449954 ATMQ13315 3056 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 VWA8A3KMH1 1905 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 ANKRD17O75179 2603 aaKnown RBP8.8□□□□□ -1
LINC01961-201ENST00000449954 ARHGEF37A1IGU5 675 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 ERICH2A1L162 156 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 IPO5O00410 1097 aaKnown RBP8.8□□□□□ -1
LINC01961-201ENST00000449954 APBB3O95704 486 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 ENGP17813 658 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 MAPK8P45983 427 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 SOX9P48436 509 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 SCNN1GP51170 649 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 PRKCEQ02156 737 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 ELAVL2Q12926 359 aaKnown RBP8.8□□□□□ -1
LINC01961-201ENST00000449954 TRIM61Q5EBN2 209 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 HAUS6Q7Z4H7 955 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 HACE1Q8IYU2 909 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 CRELD1Q96HD1 420 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 GAD1Q99259 594 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 DCTPP1Q9H773 170 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 TMPRSS4Q9NRS4 437 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 TBC1D22BQ9NU19 505 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 GABBR1Q9UBS5 961 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 PCDHB9Q9Y5E1 797 aa8.8□□□□□ -1
LINC01961-201ENST00000449954 COL6A6A6NMZ7 2263 aa8.79□□□□□ -1
LINC01961-201ENST00000449954 HEPACAM2A8MVW5 462 aa8.79□□□□□ -1
LINC01961-201ENST00000449954 DCLK1O15075 740 aa8.79□□□□□ -1
LINC01961-201ENST00000449954 DHX15O43143 795 aaKnown RBP8.79□□□□□ -1
LINC01961-201ENST00000449954 FOSP01100 380 aaPredicted RBP8.79□□□□□ -1
LINC01961-201ENST00000449954 VIPR2P41587 438 aa8.79□□□□□ -1
LINC01961-201ENST00000449954 ATXN3P54252 364 aaPredicted RBP8.79□□□□□ -1
LINC01961-201ENST00000449954 CFHR1Q03591 330 aa8.79□□□□□ -1
LINC01961-201ENST00000449954 GRIK3Q13003 919 aa8.79□□□□□ -1
LINC01961-201ENST00000449954 DRP2Q13474 957 aa8.79□□□□□ -1
LINC01961-201ENST00000449954 HSP90AA2PQ14568 343 aaPredicted RBP8.79□□□□□ -1
LINC01961-201ENST00000449954 USP39Q53GS9 565 aaKnown RBP8.79□□□□□ -1
LINC01961-201ENST00000449954 UBXN11Q5T124 520 aa8.79□□□□□ -1
LINC01961-201ENST00000449954 CYP4A22Q5TCH4 519 aa8.79□□□□□ -1
LINC01961-201ENST00000449954 FAM171A1Q5VUB5 890 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms