RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 TTYH3Q9C0H2 523 aa15.75■□□□□ 0.11
TNF-208ENST00000449264 AJAP1Q9UKB5 411 aaPredicted RBP15.75■□□□□ 0.11
TNF-208ENST00000449264 HOXA2O43364 376 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 EFCAB14O75071 495 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 BAIAP3O94812 1187 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 EPHB4P54760 987 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 ADKP55263 362 aaKnown RBP15.74■□□□□ 0.11
TNF-208ENST00000449264 RBP5P82980 135 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 RNASELQ05823 741 aaKnown RBP15.74■□□□□ 0.11
TNF-208ENST00000449264 TBX2Q13207 712 aaPredicted RBP15.74■□□□□ 0.11
TNF-208ENST00000449264 C9orf57Q5W0N0 161 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 IQCEQ6IPM2 695 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 PHLDB3Q6NSJ2 640 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 DPY19L2P1Q6NXN4 242 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 FAM117BQ6P1L5 589 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 PSRC1Q6PGN9 363 aaPredicted RBP15.74■□□□□ 0.11
TNF-208ENST00000449264 CXorf38Q8TB03 319 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 PPP1R9BQ96SB3 815 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 APOBEC3GQ9HC16 384 aaKnown RBP15.74■□□□□ 0.11
TNF-208ENST00000449264 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
TNF-208ENST00000449264 CEP72Q9P209 647 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 IMPACTQ9P2X3 320 aa15.74■□□□□ 0.11
TNF-208ENST00000449264 TBKBP1A7MCY6 615 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 RNF225M0QZC1 329 aaPredicted RBP15.73■□□□□ 0.11
TNF-208ENST00000449264 ZC3H11AO75152 810 aaKnown RBP eCLIP15.73■□□□□ 0.11
TNF-208ENST00000449264 ASS1P00966 412 aaKnown RBP15.73■□□□□ 0.11
TNF-208ENST00000449264 FGBP02675 491 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 CYP3A5P20815 502 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 NAB2Q15742 525 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 ARHGAP44Q17R89 818 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 SGSM1Q2NKQ1 1148 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 PAN2Q504Q3 1202 aaKnown RBP15.73■□□□□ 0.11
TNF-208ENST00000449264 FIGNQ5HY92 759 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 SCARA5Q6ZMJ2 495 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 CCDC186Q7Z3E2 898 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 GPIHBP1Q8IV16 184 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 RABGGTAQ92696 567 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 KAT5Q92993 513 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 TATDN2Q93075 761 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 HPDLQ96IR7 371 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 XYLT2Q9H1B5 865 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 UBE2TQ9NPD8 197 aaPredicted RBP15.73■□□□□ 0.11
TNF-208ENST00000449264 TBC1D13Q9NVG8 400 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 NUB1Q9Y5A7 615 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 AKR1B15C9JRZ8 316 aaPredicted RBP15.73■□□□□ 0.11
TNF-208ENST00000449264 INPPL1O15357 1258 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 MFAP3LO75121 409 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 ARID5BQ14865 1188 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 CRIPAKQ8N1N5 446 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 IQCDQ96DY2 449 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 CASD1Q96PB1 797 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 SPAG5Q96R06 1193 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.73■□□□□ 0.11
TNF-208ENST00000449264 NXF1Q9UBU9 619 aaKnown RBP15.73■□□□□ 0.11
TNF-208ENST00000449264 DNAJC12Q9UKB3 198 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 CAPN11Q9UMQ6 739 aa15.73■□□□□ 0.11
TNF-208ENST00000449264 LUC7L2Q9Y383 392 aaKnown RBP15.73■□□□□ 0.11
TNF-208ENST00000449264 PODXLO00592 558 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 KRT9P35527 623 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 DEKP35659 375 aaKnown RBP15.72■□□□□ 0.11
TNF-208ENST00000449264 CLCNKBP51801 687 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 MYO1EQ12965 1108 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 TUSC3Q13454 348 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 WDR72Q3MJ13 1102 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 ZNF667Q5HYK9 610 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 TMEM240Q5SV17 173 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 CNGA4Q8IV77 575 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 ZNF397Q8NF99 534 aaPredicted RBP15.72■□□□□ 0.11
TNF-208ENST00000449264 ZNF560Q96MR9 790 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 FAM193BQ96PV7 902 aaPredicted RBP15.72■□□□□ 0.11
TNF-208ENST00000449264 ARID3AQ99856 593 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 PAAF1Q9BRP4 392 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 NIF3L1Q9GZT8 377 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 KANSL3Q9P2N6 904 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 POLIQ9UNA4 740 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 NR2E3Q9Y5X4 410 aa15.72■□□□□ 0.11
TNF-208ENST00000449264 A0A1W2PQJ5 194 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 ANO9A1A5B4 782 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 LRRC53A6NM62 1247 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 PIRO00625 290 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 B4GALT3O60512 393 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 PNMA6AP0CW24 399 aaPredicted RBP15.71■□□□□ 0.11
TNF-208ENST00000449264 RFX1P22670 979 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 LRPAP1P30533 357 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 ATICP31939 592 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 GSDMDP57764 484 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 ZBED6P86452 979 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 ZNF280BQ86YH2 543 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 LRRC52Q8N7C0 313 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 BAP1Q92560 729 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 TAF4BQ92750 862 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 TOP1MTQ969P6 601 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 KREMEN1Q96MU8 473 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 NAA15Q9BXJ9 866 aaKnown RBP15.71■□□□□ 0.11
TNF-208ENST00000449264 MRPL9Q9BYD2 267 aaKnown RBP15.71■□□□□ 0.11
TNF-208ENST00000449264 CXXC1Q9P0U4 656 aaPredicted RBP15.71■□□□□ 0.11
TNF-208ENST00000449264 HCSTQ9UBK5 93 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 FBXL5Q9UKA1 691 aa15.71■□□□□ 0.11
TNF-208ENST00000449264 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.71■□□□□ 0.11
TNF-208ENST00000449264 COL4A6Q14031 1691 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms