RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 FAM207AQ9NSI2 230 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-203ENST00000449049 APEX2Q9UBZ4 518 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 FBXL5Q9UKA1 691 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 AGAP1Q9UPQ3 857 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 DAAM1Q9Y4D1 1078 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHMT2-203ENST00000449049 UPP2O95045 317 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 TRIM14Q14142 442 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 ZNF689Q96CS4 500 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-203ENST00000449049 PI4K2AQ9BTU6 479 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 MRPL9Q9BYD2 267 aaKnown RBP15.13■□□□□ 0.01
SHMT2-203ENST00000449049 IMPG2Q9BZV3 1241 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 RPL9P32969 192 aaKnown RBP15.12■□□□□ 0.01
SHMT2-203ENST00000449049 NOP14P78316 857 aaKnown RBP15.12■□□□□ 0.01
SHMT2-203ENST00000449049 WDR44Q5JSH3 913 aa15.12■□□□□ 0.01
SHMT2-203ENST00000449049 PHLDB3Q6NSJ2 640 aa15.12■□□□□ 0.01
SHMT2-203ENST00000449049 DRC7Q8IY82 874 aa15.12■□□□□ 0.01
SHMT2-203ENST00000449049 CCDC150Q8NCX0 1101 aa15.12■□□□□ 0.01
SHMT2-203ENST00000449049 UROC1Q96N76 676 aa15.12■□□□□ 0.01
SHMT2-203ENST00000449049 NT5C1BQ96P26 610 aa15.12■□□□□ 0.01
SHMT2-203ENST00000449049 APOBEC3GQ9HC16 384 aaKnown RBP15.12■□□□□ 0.01
SHMT2-203ENST00000449049 CXXC1Q9P0U4 656 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-203ENST00000449049 IMPACTQ9P2X3 320 aa15.12■□□□□ 0.01
SHMT2-203ENST00000449049 A0A1W2PQJ5 194 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 TBKBP1A7MCY6 615 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 ZBBXA8MT70 800 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 PPEF2O14830 753 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 GYPCP04921 128 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 UCHL3P15374 230 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 TRIM21P19474 475 aaKnown RBP15.11■□□□□ 0.01
SHMT2-203ENST00000449049 RFX1P22670 979 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 MAGEA10P43363 369 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-203ENST00000449049 RASIP1Q5U651 963 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 ARHGEF19Q8IW93 802 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 LRRC43Q8N309 656 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 DDX27Q96GQ7 796 aaKnown RBP15.11■□□□□ 0.01
SHMT2-203ENST00000449049 HPDLQ96IR7 371 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 ZNF560Q96MR9 790 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 NAA15Q9BXJ9 866 aaKnown RBP15.11■□□□□ 0.01
SHMT2-203ENST00000449049 EDEM3Q9BZQ6 932 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 CEP72Q9P209 647 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 B4GALT3O60512 393 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 DDHD2O94830 711 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 PNPLA4P41247 253 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 LRMPQ12912 555 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 UPP1Q16831 310 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 ZNF699Q32M78 642 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 SPOPLQ6IQ16 392 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 ZNF280BQ86YH2 543 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 COLGALT2Q8IYK4 626 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 SPC24Q8NBT2 197 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 TATDN2Q93075 761 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 ELMO3Q96BJ8 720 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 FAXDC2Q96IV6 333 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 SLC9A7Q96T83 725 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 MTIF3Q9H2K0 278 aaKnown RBP15.11■□□□□ 0.01
SHMT2-203ENST00000449049 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.11■□□□□ 0.013e-6■■■■■ 44
SHMT2-203ENST00000449049 R3HCC1Q9Y3T6 440 aaKnown RBP15.11■□□□□ 0.01
SHMT2-203ENST00000449049 NUB1Q9Y5A7 615 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 FHOD1Q9Y613 1164 aa15.11■□□□□ 0.01
SHMT2-203ENST00000449049 CASTOR2A6NHX0 329 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 PODXLO00592 558 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 CLCNKBP51801 687 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 GCNT1Q02742 428 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 RNASELQ05823 741 aaKnown RBP15.1■□□□□ 0.01
SHMT2-203ENST00000449049 CCDC173Q0VFZ6 552 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 MYO1EQ12965 1108 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 IQCEQ6IPM2 695 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 GJB7Q6PEY0 223 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 TMCO2Q7Z6W1 182 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-203ENST00000449049 CACNG4Q9UBN1 327 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 AJAP1Q9UKB5 411 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-203ENST00000449049 CAPN11Q9UMQ6 739 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 POLR2FP61218 127 aaKnown RBP15.1■□□□□ 0.01
SHMT2-203ENST00000449049 PPFIBP1Q86W92 1011 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 CMTR2Q8IYT2 770 aaKnown RBP15.1■□□□□ 0.01
SHMT2-203ENST00000449049 PHOSPHO2Q8TCD6 241 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 BAP1Q92560 729 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 FAM81BQ96LP2 452 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 FAM193BQ96PV7 902 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-203ENST00000449049 PPP1R9BQ96SB3 815 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 PAAF1Q9BRP4 392 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 NIF3L1Q9GZT8 377 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 NRDE2Q9H7Z3 1164 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 DNAJC12Q9UKB3 198 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 SLC4A7Q9Y6M7 1214 aa15.1■□□□□ 0.01
SHMT2-203ENST00000449049 RNF225M0QZC1 329 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-203ENST00000449049 GJB5O95377 273 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 CASP14P31944 242 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 RGS19P49795 217 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 TAF6P49848 677 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 FXR1P51114 621 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHMT2-203ENST00000449049 HTRA4P83105 476 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-203ENST00000449049 SV2CQ496J9 727 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 PAN2Q504Q3 1202 aaKnown RBP15.09■□□□□ 0.01
SHMT2-203ENST00000449049 ZNF667Q5HYK9 610 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 RRAGAQ7L523 313 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 ENOSF1Q7L5Y1 443 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 PPM1KQ8N3J5 372 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 TMEM175Q9BSA9 504 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms