RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, human

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-208	ENST00000448217	CCDC150	Q8NCX0	1101 aa		12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	URGCP	Q8TCY9	931 aa		12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	BAD	Q92934	168 aa		12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	TOP1MT	Q969P6	601 aa		12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	C18orf25	Q96B23	403 aa	Predicted RBP	12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	DDX27	Q96GQ7	796 aa	Known RBP	12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	UROC1	Q96N76	676 aa		12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	CASD1	Q96PB1	797 aa		12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	DNAJC7	Q99615	494 aa		12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	STK33	Q9BYT3	514 aa		12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	TUBGCP4	Q9UGJ1	667 aa		12.82	□□□□□ -0.36
SCAP-208	ENST00000448217	COL4A6	Q14031	1691 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	AKR1B15	C9JRZ8	316 aa	Predicted RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	RBAK-RBAKDN	I3L0D1	243 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	RNF225	M0QZC1	329 aa	Predicted RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	FGB	P02675	491 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	AMH	P03971	560 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	FAM163B	P0C2L3	166 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	TBXAS1	P24557	533 aa	Predicted RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	POLR2B	P30876	1174 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	POLR2F	P61218	127 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	WDR5	P61964	334 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	NOP14	P78316	857 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	SCARA3	Q6AZY7	606 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	IQCE	Q6IPM2	695 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	LIMS2	Q7Z4I7	341 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	SPC24	Q8NBT2	197 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	RNF169	Q8NCN4	708 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	ZNF397	Q8NF99	534 aa	Predicted RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	OR8K1	Q8NGG5	319 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	TATDN2	Q93075	761 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	PANX2	Q96RD6	677 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	MRPL9	Q9BYD2	267 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	RC3H2	Q9HBD1	1191 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	APOBEC3G	Q9HC16	384 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	GDAP2	Q9NXN4	497 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	DNAJC12	Q9UKB3	198 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	LRFN2	Q9ULH4	789 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	AGAP1	Q9UPQ3	857 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	NUB1	Q9Y5A7	615 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	FHOD1	Q9Y613	1164 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	PTPRS	Q13332	1948 aa		12.81	□□□□□ -0.36
SCAP-208	ENST00000448217	MKI67	P46013	3256 aa	Known RBP	12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	TMEM189-UBE2V1	I3L0A0	370 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	DGKI	O75912	1065 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	FGFR1	P11362	822 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	KRT9	P35527	623 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	AARS	P49588	968 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	GUCY2F	P51841	1108 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	MFAP3	P55082	362 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	CDK17	Q00537	523 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	APBA1	Q02410	837 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	MYO1E	Q12965	1108 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	CUL2	Q13617	745 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	UPP1	Q16831	310 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	ZNF699	Q32M78	642 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	ZNF667	Q5HYK9	610 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	TMEM240	Q5SV17	173 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	RASIP1	Q5U651	963 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	PDXDC1	Q6P996	788 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	CCDC186	Q7Z3E2	898 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	CACNA2D4	Q7Z3S7	1137 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	ARHGEF19	Q8IW93	802 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	TTC39C	Q8N584	583 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	UBR7	Q8N806	425 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	HERVK_113	Q902F9	699 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	SHC3	Q92529	594 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	ZNF689	Q96CS4	500 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	HPDL	Q96IR7	371 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	ZNF560	Q96MR9	790 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	KREMEN1	Q96MU8	473 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	PI4K2A	Q9BTU6	479 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	BCO2	Q9BYV7	579 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	NIF3L1	Q9GZT8	377 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	CYP3A43	Q9HB55	503 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	TBC1D13	Q9NVG8	400 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	AIPL1	Q9NZN9	384 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	AJAP1	Q9UKB5	411 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	CNTN6	Q9UQ52	1028 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	NR2E3	Q9Y5X4	410 aa		12.8	□□□□□ -0.36
SCAP-208	ENST00000448217	CARNS1	A5YM72	827 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217		F8VZ95	297 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	POMC	P01189	267 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	KRT19	P08727	400 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	ACR	P10323	421 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	P4HA1	P13674	534 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	ASPA	P45381	313 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	TAF6	P49848	677 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	EPHB4	P54760	987 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	DRAP1	Q14919	205 aa	Predicted RBP	12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	MEA1	Q16626	185 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	HS1BP3	Q53T59	392 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	GJB7	Q6PEY0	223 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	ZNF365	Q70YC5	407 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	COLGALT2	Q8IYK4	626 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	ABI1	Q8IZP0	508 aa		12.79	□□□□□ -0.36
SCAP-208	ENST00000448217	PPM1K	Q8N3J5	372 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms