RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 TUSC3Q13454 348 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 HSP90AA4PQ58FG1 418 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 TCP11X2Q5H9J9 407 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 CDKAL1Q5VV42 579 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 MICAL3Q7RTP6 2002 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 USP37Q86T82 979 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 LUZP1Q86V48 1076 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 WDR49Q8IV35 697 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 FAM114A1Q8IWE2 563 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 EFCAB13Q8IY85 973 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 COLGALT2Q8IYK4 626 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 LRRC43Q8N309 656 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 FIBCD1Q8N539 461 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 BEST2Q8NFU1 509 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 OR5B17Q8NGF7 314 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 FAM200AQ8TCP9 573 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 CLP1Q92989 425 aaKnown RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 CNOT6LQ96LI5 555 aaKnown RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 CGRRF1Q99675 332 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 PBX4Q9BYU1 374 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 HSD3B7Q9H2F3 369 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 DPP3Q9NY33 737 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 MAGEC2Q9UBF1 373 aaPredicted RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 MSRAQ9UJ68 235 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 UBQLN1Q9UMX0 589 aaKnown RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 YBX2Q9Y2T7 364 aaKnown RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 MRPL42Q9Y6G3 142 aaKnown RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 LINC01553A4QN01 128 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 LRRC10BA6NIK2 292 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 KCNJ18B7U540 433 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 XPOTO43592 962 aaKnown RBP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 STX10O60499 249 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TNNC2P02585 160 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 C4BPAP04003 597 aaKnown RBP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 CA3P07451 260 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 GALTP07902 379 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 LINC00271P0C7V0 271 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TRIM49P0CI25 452 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TRIM49CP0CI26 452 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 CDK11BP21127 795 aaKnown RBP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 EEF1GP26641 437 aaKnown RBP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 LRPAP1P30533 357 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 GCLMP48507 274 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 ALDH7A1P49419 539 aaKnown RBP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 CLCNKBP51801 687 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 GUCY2FP51841 1108 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 BCAR1P56945 870 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 SMAD3P84022 425 aaKnown RBP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 PPP3CAQ08209 521 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 KCNJ12Q14500 433 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 RAB30Q15771 203 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 UPP1Q16831 310 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 LRIT3Q3SXY7 679 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 SPOUT1Q5T280 376 aaKnown RBP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 LMBRD2Q68DH5 695 aaPredicted RBP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 SCARA3Q6AZY7 606 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 DCLRE1AQ6PJP8 1040 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 THSD4Q6ZMP0 1018 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 C15orf39Q6ZRI6 1047 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 SV2AQ7L0J3 742 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TRAPPC11Q7Z392 1133 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 GAS2L3Q86XJ1 694 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TRIM59Q8IWR1 403 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TMEM130Q8N3G9 435 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 C1orf127Q8N9H9 656 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 CXorf38Q8TB03 319 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 RABGGTAQ92696 567 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 SLC35C1Q96A29 364 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 ANKRD36BP1Q96IX9 119 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 FAM84AQ96KN4 292 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 UROC1Q96N76 676 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TMEM175Q9BSA9 504 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TUBGCP2Q9BSJ2 902 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 MTMR12Q9C0I1 747 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 GOLGA2P5Q9HBQ8 144 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 HCSTQ9UBK5 93 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 CACNG4Q9UBN1 327 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 DNAJB4Q9UDY4 337 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TUBGCP4Q9UGJ1 667 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 TSR3Q9UJK0 312 aaKnown RBP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 FAN1Q9Y2M0 1017 aa8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.15□□□□□ -1.1
AC004540.1-206ENST00000448056 LAMA3Q16787 3333 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 ANO9A1A5B4 782 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 CASTOR2A6NHX0 329 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 PODXLO00592 558 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 PIRO00625 290 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 NRP1O14786 923 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 PMM2O15305 246 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 ZC3H11AO75152 810 aaKnown RBP eCLIP8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 PHACTR2O75167 634 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 ARHGEF15O94989 841 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 CST3P01034 146 aaPredicted RBP8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 TMEM191BP0C7N4 346 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 ATP1A3P13637 1013 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 LAG3P18627 525 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 IGFBP6P24592 240 aaPredicted RBP8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 BMPR1AP36894 532 aa8.14□□□□□ -1.11
AC004540.1-206ENST00000448056 PBX3P40426 434 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms