RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 FAM171A1Q5VUB5 890 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 ANKRD40Q6AI12 368 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 PDXDC1Q6P996 788 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 FOXR2Q6PJQ5 311 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 FAM186BQ8IYM0 893 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 MAFAQ8NHW3 353 aaPredicted RBP14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 NELFBQ8WX92 580 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 CGRRF1Q99675 332 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 MKNK1Q9BUB5 465 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 INTS13Q9NVM9 706 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 ITGA11Q9UKX5 1188 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 IRAK3Q9Y616 596 aa14.14□□□□□ -0.15
ERGIC3-209ENST00000447986 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 ARHGEF37A1IGU5 675 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 NCK2O43639 380 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 AKAP3O75969 853 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 PNPLA4P41247 253 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 CASP4P49662 377 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 WNT7BP56706 349 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 CCDC85BQ15834 202 aaPredicted RBP14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 C9orf57Q5W0N0 161 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 SASS6Q6UVJ0 657 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 CEP57Q86XR8 500 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 GPR65Q8IYL9 337 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 RNF168Q8IYW5 571 aaPredicted RBP14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 MRPL43Q8N983 215 aaKnown RBP14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 PPM1EQ8WY54 764 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 ZNF560Q96MR9 790 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 CDCA3Q99618 268 aaPredicted RBP14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 TTPALQ9BTX7 342 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 EMILIN2Q9BXX0 1053 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 GPR62Q9BZJ7 368 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 MTMR12Q9C0I1 747 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 TLE6Q9H808 572 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 CTNND2Q9UQB3 1225 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 PLXNA4Q9HCM2 1894 aa14.13□□□□□ -0.15
ERGIC3-209ENST00000447986 ANO9A1A5B4 782 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 TRIM49BA6NDI0 452 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 C2CD2LO14523 706 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 SLC16A3O15427 465 aaKnown RBP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 FGFR1OPO95684 399 aaKnown RBP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 EFEMP2O95967 443 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 ITGB3P05106 788 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 KRT19P08727 400 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 TAF6P49848 677 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 GUCY2FP51841 1108 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 NLRP12P59046 1061 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 RBP5P82980 135 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 DSG1Q02413 1049 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 ENPEPQ07075 957 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 SKIV2LQ15477 1246 aaKnown RBP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 SV2CQ496J9 727 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 TCEAL5Q5H9L2 206 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 DSTYKQ6XUX3 929 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 CSGALNACT2Q8N6G5 542 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 C3orf58Q8NDZ4 430 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 TMC2Q8TDI7 906 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 PARD3BQ8TEW8 1205 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 VN1R3Q9BXE9 311 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 CHST7Q9NS84 486 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 C2orf71A6NGG8 1288 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 PIRO00625 290 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 IKBKBO14920 756 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 SYN3O14994 580 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 SRGAP2BP0DMP2 458 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 POLR2BP30876 1174 aaKnown RBP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 BRCC3P46736 316 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 VAMP7P51809 220 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 PMS1P54277 932 aaKnown RBP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 BFSP1Q12934 665 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 MYO1EQ12965 1108 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 PTPN14Q15678 1187 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 KLHL40Q2TBA0 621 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 SKOR2Q2VWA4 1001 aaPredicted RBP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 CT47A1Q5JQC4 288 aaPredicted RBP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 LMBRD2Q68DH5 695 aaPredicted RBP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 RBM43Q6ZSC3 357 aaKnown RBP14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 LRRC52Q8N7C0 313 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 C1orf127Q8N9H9 656 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 APPL2Q8NEU8 664 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 SUSD3Q96L08 255 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 CEP63Q96MT8 703 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 RWDD2AQ9UIY3 292 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 AGAP1Q9UPQ3 857 aa14.12□□□□□ -0.15
ERGIC3-209ENST00000447986 CHD9Q3L8U1 2897 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 LRRIQ3A6PVS8 624 aaPredicted RBP14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 STX10O60499 249 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 PHACTR2O75167 634 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 FGFR3P22607 806 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 NRIP1P48552 1158 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 STX17P56962 302 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 LILRA4P59901 499 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 CLDN10P78369 228 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 BIRC3Q13489 604 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 TRPC3Q13507 836 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 TPD52L1Q16890 204 aaPredicted RBP14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 TTI2Q6NXR4 508 aa14.11□□□□□ -0.15
ERGIC3-209ENST00000447986 CAVIN1Q6NZI2 390 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms