RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 INTS13Q9NVM9 706 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 FANCLQ9NW38 375 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 MIOSQ9NXC5 875 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 HCSTQ9UBK5 93 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 PUF60Q9UHX1 559 aaKnown RBP12.52□□□□□ -0.41
LINC00408-201ENST00000447784 FAN1Q9Y2M0 1017 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC00408-201ENST00000447784 WDR81Q562E7 1941 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 A0A0C4DFX4 3053 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 CASTOR2A6NHX0 329 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 MEFVO15553 781 aaPredicted RBP12.51□□□□□ -0.41
LINC00408-201ENST00000447784 KRT19P08727 400 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 EEF1GP26641 437 aaKnown RBP12.51□□□□□ -0.41
LINC00408-201ENST00000447784 GTF2H1P32780 548 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 RBP5P82980 135 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 KRT17Q04695 432 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 CETN1Q12798 172 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 TRPC3Q13507 836 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 KCNJ12Q14500 433 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 CTC1Q2NKJ3 1217 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 HSP90AA4PQ58FG1 418 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 FAM200AQ8TCP9 573 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 C18orf25Q96B23 403 aaPredicted RBP12.51□□□□□ -0.41
LINC00408-201ENST00000447784 CNOT6LQ96LI5 555 aaKnown RBP12.51□□□□□ -0.41
LINC00408-201ENST00000447784 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 NRDE2Q9H7Z3 1164 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 CBX8Q9HC52 389 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 DPP3Q9NY33 737 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 SPG21Q9NZD8 308 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
LINC00408-201ENST00000447784 LRRIQ3A6PVS8 624 aaPredicted RBP12.5□□□□□ -0.41
LINC00408-201ENST00000447784 PES1O00541 588 aaKnown RBP12.5□□□□□ -0.41
LINC00408-201ENST00000447784 PODXLO00592 558 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 N4BP1O75113 896 aaKnown RBP12.5□□□□□ -0.41
LINC00408-201ENST00000447784 TADA2AO75478 443 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 B3GAT3O94766 335 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 DDHD2O94830 711 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 TRIM49P0CI25 452 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 TRIM49CP0CI26 452 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 IRS1P35568 1242 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 BCAR1P56945 870 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 DLG4P78352 724 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 DSC1Q08554 894 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 HYAL1Q12794 435 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 ZBTB6Q15916 424 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 LEXMQ3ZCV2 418 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 LMBRD2Q68DH5 695 aaPredicted RBP12.5□□□□□ -0.41
LINC00408-201ENST00000447784 DCLRE1AQ6PJP8 1040 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 EFCAB13Q8IY85 973 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 COLGALT2Q8IYK4 626 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 SLC39A11Q8N1S5 342 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 CCDC150Q8NCX0 1101 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 BORCS6Q96GS4 357 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 MTMR12Q9C0I1 747 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 TLR9Q9NR96 1032 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 SAMSN1Q9NSI8 373 aaKnown RBP12.5□□□□□ -0.41
LINC00408-201ENST00000447784 ITGA11Q9UKX5 1188 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 PRG3Q9Y2Y8 225 aaPredicted RBP12.5□□□□□ -0.41
LINC00408-201ENST00000447784 NUB1Q9Y5A7 615 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 RALGAPA2Q2PPJ7 1873 aa12.5□□□□□ -0.41
LINC00408-201ENST00000447784 PRRC2BQ5JSZ5 2229 aaKnown RBP12.49□□□□□ -0.41
LINC00408-201ENST00000447784 FSD2A1L4K1 749 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 NRP1O14786 923 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 FSCN2O14926 492 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 TRAPPC3O43617 180 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 ITGB3P05106 788 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 GALTP07902 379 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 PRKCSHP14314 528 aaPredicted RBP12.49□□□□□ -0.41
LINC00408-201ENST00000447784 KCNA5P22460 613 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 PAX3P23760 479 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 LRPAP1P30533 357 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 PNPLA4P41247 253 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 GCLMP48507 274 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 SLC11A1P49279 550 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 KCNQ1P51787 676 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 CLCNKBP51801 687 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 MARSP56192 900 aaKnown RBP12.49□□□□□ -0.41
LINC00408-201ENST00000447784 WNT7BP56706 349 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 CLDN10P78369 228 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 MYO1EQ12965 1108 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
LINC00408-201ENST00000447784 TCP11X2Q5H9J9 407 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 KRT39Q6A163 491 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 SV2AQ7L0J3 742 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 TRAPPC11Q7Z392 1133 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 LUZP1Q86V48 1076 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 TRIM59Q8IWR1 403 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 DHX40Q8IX18 779 aaKnown RBP12.49□□□□□ -0.41
LINC00408-201ENST00000447784 OR5B17Q8NGF7 314 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 ADAMTS19Q8TE59 1207 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 TMEM169Q96HH4 297 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 GOLGA2P5Q9HBQ8 144 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 TMEM8AQ9HCN3 771 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 NGRNQ9NPE2 291 aaKnown RBP12.49□□□□□ -0.41
LINC00408-201ENST00000447784 DNAJB4Q9UDY4 337 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 AGAP1Q9UPQ3 857 aa12.49□□□□□ -0.41
LINC00408-201ENST00000447784 AFPP02771 609 aaKnown RBP12.48□□□□□ -0.41
LINC00408-201ENST00000447784 POLR2BP30876 1174 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms