RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 KRT16P08779 473 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 CCDC130P13994 396 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 PDE4DQ08499 809 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 PPIL2Q13356 520 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 C16orf72Q14CZ0 275 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 SLC10A5Q5PT55 438 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 BPHLQ86WA6 291 aaPredicted RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 ESX1Q8N693 406 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 DNAAF3Q8N9W5 541 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 PIK3C3Q8NEB9 887 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 RNASE11Q8TAA1 199 aaKnown RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 RAB2BQ8WUD1 216 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ECSITQ9BQ95 431 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 RMND5AQ9H871 391 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 CD320Q9NPF0 282 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 RIC8AQ9NPQ8 531 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 NMRK1Q9NWW6 199 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 DDX43Q9NXZ2 648 aaKnown RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 MYRFQ9Y2G1 1151 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 PTPRKQ15262 1439 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ADGRA2Q96PE1 1338 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ABCC10Q5T3U5 1492 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 SNAP23O00161 211 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 EPN2O95208 641 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 APOL3O95236 402 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 CRYZL1O95825 349 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 SERPING1P05155 500 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 MYCLP1P12525 358 aaPredicted RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 KRT10P13645 584 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 PSMC3P17980 439 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ZNF844Q08AG5 666 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 GALNT1Q10472 559 aaPredicted RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 NAB1Q13506 487 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 TYSND1Q2T9J0 566 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ZNF568Q3ZCX4 644 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 OR52E8Q6IFG1 317 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 IDO2Q6ZQW0 420 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ANKRD13CQ8N6S4 541 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 SYTL5Q8TDW5 730 aaPredicted RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 OSBPL11Q9BXB4 747 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 UBE2OQ9C0C9 1292 aaKnown RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 UBA2Q9UBT2 640 aaPredicted RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 NOSIPQ9Y314 301 aaKnown RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 DTNAQ9Y4J8 743 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ZHX2Q9Y6X8 837 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 CEP170Q5SW79 1584 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ANKARQ7Z5J8 1434 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SYNJ2BP-COX16A0A087WUM0 186 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 A0A088AWK7 358 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 C2orf81A6NN90 581 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 KCNJ18B7U540 433 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SGTAO43765 313 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 FKBP9O95302 570 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TRAPPC2P0DI81 140 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TRAPPC2BP0DI82 140 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 NDUFA8P51970 172 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 KCNJ12Q14500 433 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 MAN2A1Q16706 1144 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SNAP47Q5SQN1 464 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TXNDC2Q86VQ3 553 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 OR6Y1Q8NGX8 325 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 MMS19Q96T76 1030 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 EPC1Q9H2F5 836 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SLC24A2Q9UI40 661 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SOX13Q9UN79 622 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 AGPSO00116 658 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 IDH1O75874 414 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 PHKA2P46019 1235 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 BPIFB4P59827 614 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 BFSP1Q12934 665 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 MEA1Q16626 185 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 EAPPQ56P03 285 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 TJAP1Q5JTD0 557 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 FAM91A1Q658Y4 838 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 C4orf50Q6ZRC1 276 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 AKAP14Q86UN6 197 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 CRLF3Q8IUI8 442 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 SRRM1Q8IYB3 904 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 MCOLN3Q8TDD5 553 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD9-203ENST00000447540 LPIN3Q9BQK8 851 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 PLEKHA4Q9H4M7 779 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 DENND2AQ9ULE3 1009 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 KIF1BO60333 1816 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 EME2A4GXA9 379 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 BTNL10A8MVZ5 291 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 POLR3DP05423 398 aaPredicted RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 XRCC5P13010 732 aaKnown RBP3.06□□□□□ -1.92
CHD9-203ENST00000447540 NPR1P16066 1061 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 CASP5P51878 434 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 POU5F1BQ06416 359 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 PKN1Q16512 942 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 ARHGAP44Q17R89 818 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TMEM266Q2M3C6 531 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 C4orf22Q6V702 233 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 CCDC81Q6ZN84 652 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 MIGA2Q7L4E1 593 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 CHPT1Q8WUD6 406 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TLCD1Q96CP7 247 aa3.06□□□□□ -1.92
CHD9-203ENST00000447540 TGS1Q96RS0 853 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms