RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 MYL6P60660 151 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 TRPC3Q13507 836 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 NCOA4Q13772 614 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 SP7Q8TDD2 431 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 PI4K2AQ9BTU6 479 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 RTN4Q9NQC3 1192 aaKnown RBP19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 YBX2Q9Y2T7 364 aaKnown RBP19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 RANBP2P49792 3224 aaKnown RBP19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 PLXNA4Q9HCM2 1894 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 VWA8A3KMH1 1905 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 MYO9BQ13459 2157 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 A0A1B0GTH6 734 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 PIRO00625 290 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 NRP1O14786 923 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 CLSTN1O94985 981 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 GALTP07902 379 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 RBP5P82980 135 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 UBXN1Q04323 297 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 UPP1Q16831 310 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 UVSSAQ2YD98 709 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 FILIP1LQ4L180 1135 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 EPC2Q52LR7 807 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 C3orf58Q8NDZ4 430 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 FBXL13Q8NEE6 735 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 HASPINQ8TF76 798 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 UROC1Q96N76 676 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 XPO4Q9C0E2 1151 aaKnown RBP19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 COQ4Q9Y3A0 265 aa19.38■□□□□ 0.69
TRAPPC4-203ENST00000447216 TRIOBPQ9H2D6 2365 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 KIF4AO95239 1232 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 ITGB1P05556 798 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 RPL9P32969 192 aaKnown RBP19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 FKBP15Q5T1M5 1219 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 SPOPLQ6IQ16 392 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 CD300LGQ6UXG3 332 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 GBP6Q6ZN66 633 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 SPRED2Q7Z698 418 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 COLGALT1Q8NBJ5 622 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 DDX27Q96GQ7 796 aaKnown RBP19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 TMEM175Q9BSA9 504 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 INTS2Q9H0H0 1204 aaKnown RBP19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 RAB20Q9NX57 234 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 GCNT4Q9P109 453 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 FAN1Q9Y2M0 1017 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 R3HCC1Q9Y3T6 440 aaKnown RBP19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 PCDHA11Q9Y5I1 949 aa19.37■□□□□ 0.69
TRAPPC4-203ENST00000447216 FSD2A1L4K1 749 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 LINC01553A4QN01 128 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 GOLGA6L3A6NEY3 463 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 SPTLC1O15269 473 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 PMM2O15305 246 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 P4HA2O15460 535 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 ALDH2P05091 517 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 CA3P07451 260 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 LINC00271P0C7V0 271 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 LAG3P18627 525 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 SLC9A1P19634 815 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 KLK7P49862 253 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 APBA1Q02410 837 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 KCNMA1Q12791 1236 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 LRMPQ12912 555 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 NR1I3Q14994 352 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 DCLRE1AQ6PJP8 1040 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 KCNT2Q6UVM3 1135 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 TMEM173Q86WV6 379 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 EHBP1Q8NDI1 1231 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 LMO3Q8TAP4 145 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 BCL7CQ8WUZ0 217 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 HPDLQ96IR7 371 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 ZNF558Q96NG5 402 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 PBX4Q9BYU1 374 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 XYLT2Q9H1B5 865 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 NKX2-4Q9H2Z4 354 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 MARCH5Q9NX47 278 aa19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC4-203ENST00000447216 TSC2P49815 1807 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 GTPBP10A4D1E9 387 aaKnown RBP19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 I3L4J1 428 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 B3GAT3O94766 335 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 BRCC3P46736 316 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 CETN1Q12798 172 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 SYCP1Q15431 976 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 EXOC3L4Q17RC7 722 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 ZNF699Q32M78 642 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 SARM1Q6SZW1 724 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 LRRC52Q8N7C0 313 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 ZNF560Q96MR9 790 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 COLEC11Q9BWP8 271 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 LSM14BQ9BX40 385 aaKnown RBP19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 TRIM5Q9C035 493 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 APOBEC3GQ9HC16 384 aaKnown RBP19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 POLIQ9UNA4 740 aa19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 COLQQ9Y215 455 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC4-203ENST00000447216 ASS1P00966 412 aaKnown RBP19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 PON1P27169 355 aa19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 ALDH7A1P49419 539 aaKnown RBP19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 TAF6P49848 677 aa19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 LILRA4P59901 499 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms