RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 MTMR6Q9Y217 621 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MYH11P35749 1972 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 H7C4K7 107 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 M0QZQ0 153 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PI15O43692 258 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 CFHP08603 1231 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 MATR3P43243 847 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PABPC1LQ4VXU2 614 aaKnown RBP17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 POTEHQ6S545 545 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PARM1Q6UWI2 310 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 FLCNQ8NFG4 579 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ST13P5Q8NFI4 369 aaPredicted RBP17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 DDX12PQ92771 950 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 KIF12Q96FN5 646 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 TSPAN18Q96SJ8 248 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 SLC2A4RGQ9NR83 387 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 STK17AQ9UEE5 414 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 CPSF3Q9UKF6 684 aaKnown RBP17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 FBXL21Q9UKT6 434 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 KCNH3Q9ULD8 1083 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 UBQLN1Q9UMX0 589 aaKnown RBP17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PCDHB8Q9UN66 801 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 POLIQ9UNA4 740 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 STYXL1Q9Y6J8 313 aa17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PDCD11Q14690 1871 aaKnown RBP17.26■□□□□ 0.35
SPTLC1P1-201ENST00000447199 NOTCH4Q99466 2003 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ANKRD63C9JTQ0 380 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 H0Y858 1186 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 TBCAO75347 108 aaKnown RBP17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PPP1R37O75864 691 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 SEC24AO95486 1093 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 KRT18P05783 430 aaKnown RBP17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ABCD1P33897 745 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 MCM4P33991 863 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PPP2R3AQ06190 1150 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 SLC5A9Q2M3M2 681 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ZC2HC1CQ53FD0 456 aaPredicted RBP17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 TPGS2Q68CL5 300 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ZNF280DQ6N043 979 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 NPAS3Q8IXF0 933 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 APPL2Q8NEU8 664 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 GPR152Q8TDT2 470 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 DNAJC19Q96DA6 116 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 STRA6Q9BX79 667 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 IRF2BPLQ9H1B7 796 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 FAM86C1Q9NVL1 165 aa17.25■□□□□ 0.35
SPTLC1P1-201ENST00000447199 TISP43B9A030 160 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 K7ELQ4 463 aaPredicted RBP17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 OAZ2O95190 189 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 RHOP08100 348 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 GUCY2FP51841 1108 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 SLC39A14Q15043 492 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 CTXN3Q4LDR2 81 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 SPATA1Q5VX52 437 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ZNF720Q7Z2F6 126 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 BEST2Q8NFU1 509 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 USP28Q96RU2 1077 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 MSTO1Q9BUK6 570 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 IKZF4Q9H2S9 585 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ZHX3Q9H4I2 956 aa17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 RPF1Q9H9Y2 349 aaKnown RBP17.24■□□□□ 0.35
SPTLC1P1-201ENST00000447199 MYMKA6NI61 221 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PPEF2O14830 753 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PRSS36Q5K4E3 855 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 JADE1Q6IE81 842 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 MTSS1LQ765P7 747 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 DYMQ7RTS9 669 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 SFR1Q86XK3 245 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 CD302Q8IX05 232 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 CCDC105Q8IYK2 499 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 KRI1Q8N9T8 703 aaKnown RBP17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 RTP3Q9BQQ7 232 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 CYP4F11Q9HBI6 524 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 CCDC39Q9UFE4 941 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 AFF4Q9UHB7 1163 aaKnown RBP17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 CA14Q9ULX7 337 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 MAFFQ9ULX9 164 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 INSL5Q9Y5Q6 135 aa17.23■□□□□ 0.35
SPTLC1P1-201ENST00000447199 A0A087X0B3 334 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PROB1E7EW31 1015 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PRRG1O14668 218 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 XPOTO43592 962 aaKnown RBP17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 STX6O43752 255 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 VNN2O95498 520 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 LRG1P02750 347 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ELF1P32519 619 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ARPP19P56211 112 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 GPC5P78333 572 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 CEBPZQ03701 1054 aaKnown RBP17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 YWHAHQ04917 246 aaPredicted RBP17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 RRAGBQ5VZM2 374 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 PHLDB3Q6NSJ2 640 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ING5Q8WYH8 240 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ATOH1Q92858 354 aaPredicted RBP17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ZSCAN16Q9H4T2 348 aaPredicted RBP17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 ARHGEF3Q9NR81 526 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 GDE1Q9NZC3 331 aa17.22■□□□□ 0.35
SPTLC1P1-201ENST00000447199 SEL1LQ9UBV2 794 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms