RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 SHISA7A6NL88 538 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 MCF2P10911 925 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 MARCKSP29966 332 aaPredicted RBP26.67■■□□□ 1.86
PMS1-214ENST00000446877 CCR2P41597 374 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 FXR2P51116 673 aaKnown RBP eCLIP26.67■■□□□ 1.86
PMS1-214ENST00000446877 GNL2Q13823 731 aaKnown RBP26.67■■□□□ 1.86
PMS1-214ENST00000446877 ZNF280DQ6N043 979 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 CELF5Q8N6W0 485 aaKnown RBP26.67■■□□□ 1.86
PMS1-214ENST00000446877 LEMD2Q8NC56 503 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 DEPDC1BQ8WUY9 529 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 CNTNAP3BQ96NU0 1288 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 RTKNQ9BST9 563 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 TARS2Q9BW92 718 aaKnown RBP26.67■■□□□ 1.86
PMS1-214ENST00000446877 CNTNAP3Q9BZ76 1288 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 FOXP1Q9H334 677 aaPredicted RBP26.67■■□□□ 1.86
PMS1-214ENST00000446877 KMT5AQ9NQR1 393 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 AFF4Q9UHB7 1163 aaKnown RBP26.67■■□□□ 1.86
PMS1-214ENST00000446877 DNM3Q9UQ16 869 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 PIAS3Q9Y6X2 628 aa26.67■■□□□ 1.86
PMS1-214ENST00000446877 NOTCH4Q99466 2003 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 ZNF263O14978 683 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 MYL4P12829 197 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 MCM4P33991 863 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 CCR3P51677 355 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 TWF1Q12792 350 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 VITQ6UXI7 678 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 MAP4K3Q8IVH8 894 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 HS6ST3Q8IZP7 471 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 ZNF687Q8N1G0 1237 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 C18orf25Q96B23 403 aaPredicted RBP26.66■■□□□ 1.86
PMS1-214ENST00000446877 SUSD3Q96L08 255 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 ZSWIM3Q96MP5 696 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 RAB34Q9BZG1 259 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 ASAH2Q9NR71 780 aa26.66■■□□□ 1.86
PMS1-214ENST00000446877 TPRP12270 2363 aaKnown RBP26.65■■□□□ 1.86
PMS1-214ENST00000446877 EPG5Q9HCE0 2579 aa26.65■■□□□ 1.86
PMS1-214ENST00000446877 HARSP12081 509 aaKnown RBP26.65■■□□□ 1.86
PMS1-214ENST00000446877 VIPR2P41587 438 aa26.65■■□□□ 1.86
PMS1-214ENST00000446877 PDIA5Q14554 519 aa26.65■■□□□ 1.86
PMS1-214ENST00000446877 SNX29Q8TEQ0 813 aa26.65■■□□□ 1.86
PMS1-214ENST00000446877 DRC1Q96MC2 740 aa26.65■■□□□ 1.86
PMS1-214ENST00000446877 CNTN3Q9P232 1028 aa26.65■■□□□ 1.86
PMS1-214ENST00000446877 NOL7Q9UMY1 257 aaKnown RBP26.65■■□□□ 1.86
PMS1-214ENST00000446877 SPTBN2O15020 2390 aa26.65■■□□□ 1.86
PMS1-214ENST00000446877 F5P12259 2224 aa26.65■■□□□ 1.86
PMS1-214ENST00000446877 CPB1P15086 417 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 TGM1P22735 817 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 CXCL12P48061 93 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 LPAL2Q16609 132 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 LAIR1Q6GTX8 287 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 MPZL3Q6UWV2 235 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 YAF2Q8IY57 180 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 ZSCAN18Q8TBC5 510 aaPredicted RBP26.64■■□□□ 1.86
PMS1-214ENST00000446877 TBC1D32Q96NH3 1257 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 GPR88Q9GZN0 384 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 SLITRK6Q9H5Y7 841 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 CEP72Q9P209 647 aa26.64■■□□□ 1.86
PMS1-214ENST00000446877 DCDC2BA2VCK2 349 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 HIP1RO75146 1068 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 TDGF1P13385 188 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 TRAPPC10P48553 1259 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 PRR23BQ6ZRT6 265 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 MFSD6LQ8IWD5 586 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 CSGALNACT1Q8TDX6 532 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 DDX12PQ92771 950 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 E2F7Q96AV8 911 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 TRPV4Q9HBA0 871 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 PARD6AQ9NPB6 346 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 ARHGAP28Q9P2N2 729 aa26.63■■□□□ 1.85
PMS1-214ENST00000446877 GJA1P17302 382 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 PROZP22891 400 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 CCNE1P24864 410 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 SPEM2Q0P670 501 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 STRN3Q13033 797 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 C17orf75Q9HAS0 396 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 KCNG1Q9UIX4 513 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 PCDHB8Q9UN66 801 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 CACNA1BQ00975 2339 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 PATJQ8NI35 1801 aa26.62■■□□□ 1.85
PMS1-214ENST00000446877 NRG2O14511 850 aaPredicted RBP26.61■■□□□ 1.85
PMS1-214ENST00000446877 MOSPD3O75425 235 aa26.61■■□□□ 1.85
PMS1-214ENST00000446877 EPHA5P54756 1037 aa26.61■■□□□ 1.85
PMS1-214ENST00000446877 TEAD2Q15562 447 aa26.61■■□□□ 1.85
PMS1-214ENST00000446877 KRT79Q5XKE5 535 aa26.61■■□□□ 1.85
PMS1-214ENST00000446877 C1orf228Q6PIY5 440 aa26.61■■□□□ 1.85
PMS1-214ENST00000446877 RNF19BQ6ZMZ0 732 aa26.61■■□□□ 1.85
PMS1-214ENST00000446877 TAS1R3Q7RTX0 852 aa26.61■■□□□ 1.85
PMS1-214ENST00000446877 DAW1Q8N136 415 aa26.61■■□□□ 1.85
PMS1-214ENST00000446877 C4orf32Q8N8J7 132 aa26.61■■□□□ 1.85
PMS1-214ENST00000446877 HEPACAM2A8MVW5 462 aa26.6■■□□□ 1.85
PMS1-214ENST00000446877 E9PMD0 336 aa26.6■■□□□ 1.85
PMS1-214ENST00000446877 RETP07949 1114 aa26.6■■□□□ 1.85
PMS1-214ENST00000446877 MLLT6P55198 1093 aaPredicted RBP26.6■■□□□ 1.85
PMS1-214ENST00000446877 PLD1Q13393 1074 aa26.6■■□□□ 1.85
PMS1-214ENST00000446877 LRRC32Q14392 662 aa26.6■■□□□ 1.85
PMS1-214ENST00000446877 MSANTD3Q96H12 275 aa26.6■■□□□ 1.85
PMS1-214ENST00000446877 OXCT2Q9BYC2 517 aaPredicted RBP26.6■■□□□ 1.85
PMS1-214ENST00000446877 ANKFY1Q9P2R3 1169 aa26.6■■□□□ 1.85
PMS1-214ENST00000446877 ACACBO00763 2458 aa26.59■■□□□ 1.85
PMS1-214ENST00000446877 SLC16A4O15374 487 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms