RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MTHFD1LQ6UB35 978 aa8.27□□□□□ -1.08
SMG1-202ENST00000446231 NAGPAQ9UK23 515 aa8.27□□□□□ -1.08
SMG1-202ENST00000446231 CDYLQ9Y232 598 aa8.27□□□□□ -1.08
SMG1-202ENST00000446231 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 PI4K2BG5E9Z4 385 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 SMARCA1P28370 1054 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 RPS8P62241 208 aaKnown RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 CDR2LQ86X02 465 aaPredicted RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 DDX17Q92841 729 aaKnown RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 SNX25Q9H3E2 840 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 IQSEC2Q5JU85 1478 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 DDX39AO00148 427 aaKnown RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 NUDT17P0C025 328 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 MYL2P10916 166 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 POLD1P28340 1107 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 GABPAQ06546 454 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 RBM12BQ8IXT5 1001 aaKnown RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 LRRC47Q8N1G4 583 aaKnown RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 FAXDC2Q96IV6 333 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 BCL10O95999 233 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 KRT19P08727 400 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 PADI6Q6TGC4 694 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 DACT3Q96B18 629 aaPredicted RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 PDXKO00764 312 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 PON1P27169 355 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 DEFA1P59665 94 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 DEFA3P59666 94 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 ACAP1Q15027 740 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 RIPOR1Q6ZS17 1223 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 ARMCX1Q9P291 453 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 ZHX2Q9Y6X8 837 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 ABCC10Q5T3U5 1492 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 MYCLP12524 364 aaPredicted RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 UCMAQ8WVF2 138 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 CNDP1Q96KN2 507 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 SEC31BQ9NQW1 1179 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 YEATS2Q9ULM3 1422 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 THRAP10827 490 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 RPL21P46778 160 aaKnown RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 ZBTB49Q6ZSB9 765 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 FRA10AC1Q70Z53 315 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 ARID3BQ8IVW6 561 aaPredicted RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 ABHD8Q96I13 439 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 BARHL2Q9NY43 387 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 PPP1R14BQ96C90 147 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 DCUN1D5Q9BTE7 237 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 SLC24A2Q9UI40 661 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 ZBED1O96006 694 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 CCNFP41002 786 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 CDAN1Q8IWY9 1227 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 C1orf50Q9BV19 199 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 DCLK3Q9C098 648 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 HSD3B7Q9H2F3 369 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 ABCB11O95342 1321 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 RRP1BQ14684 758 aaKnown RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 PCNX4Q63HM2 1172 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 SPDYE5A6NIY4 337 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 AGXT2Q9BYV1 514 aa8.27□□□□□ -1.09
SMG1-202ENST00000446231 NKX1-2Q9UD57 310 aaPredicted RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 ZMYND8Q9ULU4 1186 aaPredicted RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 THRAP3Q9Y2W1 955 aaKnown RBP8.27□□□□□ -1.09
SMG1-202ENST00000446231 KPNA2P52292 529 aaKnown RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 IFRD2Q12894 506 aaPredicted RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 COPG2Q9UBF2 871 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 APPL1Q9UKG1 709 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 ITSN2Q9NZM3 1697 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 CD58P19256 250 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 DNAJC10Q8IXB1 793 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 PTPRN2Q92932 1015 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 ACSBG1Q96GR2 724 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 SDK1Q7Z5N4 2213 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 AQP5P55064 265 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 BNIP1Q12981 228 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 FAM118BQ9BPY3 351 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 GPAMQ9HCL2 828 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 XPO7Q9UIA9 1087 aaKnown RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 C5orf60A6NFR6 353 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 FAM196BA6NMK8 535 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 ZNF839A8K0R7 811 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 ATMINO43313 823 aaPredicted RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 PMLP29590 882 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 RABL6Q3YEC7 729 aaPredicted RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 DDX50Q9BQ39 737 aaKnown RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 WDR37Q9Y2I8 494 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 CENPPQ6IPU0 288 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 RSPH3Q86UC2 560 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 CALN1Q9BXU9 219 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 FHDC1Q9C0D6 1143 aaPredicted RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 UBE2Q2LH0YL09 131 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 CCDC166P0CW27 439 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 DYNLL1P63167 89 aaKnown RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 ZBTB18Q99592 522 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 RSL24D1Q9UHA3 163 aaKnown RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 PCDHGC5Q9Y5F6 944 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 TNNC2P02585 160 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 ALDH1A3P47895 512 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 TRIM25Q14258 630 aaKnown RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 TRAF7Q6Q0C0 670 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 ZNF354CQ86Y25 554 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms