RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 HIDE1A8MVS5 230 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 PER2O15055 1255 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 TGFB1I1O43294 461 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 CLASP2O75122 1294 aaKnown RBP13.24□□□□□ -0.29
LTBR-204ENST00000444814 NFICP08651 508 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 ODC1P11926 461 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 KRT13P13646 458 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 TNNI1P19237 187 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 FGFR3P22607 806 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 TAF6P49848 677 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 RBP5P82980 135 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 NFIL3Q16649 462 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 COBLL1Q53SF7 1204 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 ZBTB41Q5SVQ8 909 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 KIAA0319Q5VV43 1072 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 ZNF280DQ6N043 979 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 RTL10Q7L3V2 364 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 ADGRD2Q7Z7M1 963 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 WDR49Q8IV35 697 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 SUSD3Q96L08 255 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 FBXL18Q96ME1 805 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 KLHL5Q96PQ7 755 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 PLEKHA4Q9H4M7 779 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 GOLGA2P5Q9HBQ8 144 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 TUBGCP4Q9UGJ1 667 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 PCDHB8Q9UN66 801 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 TRAF3IP3Q9Y228 551 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 PCDHA5Q9Y5H7 936 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 BACE2Q9Y5Z0 518 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 BICDL2A1A5D9 508 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 CLIC2O15247 247 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 MAPK13O15264 365 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 NR3C1P04150 777 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 ITIH3Q06033 890 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 SOX4Q06945 474 aaPredicted RBP13.24□□□□□ -0.29
LTBR-204ENST00000444814 SPAG1Q07617 926 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 SMAD4Q13485 552 aaKnown RBP13.24□□□□□ -0.29
LTBR-204ENST00000444814 PSMD6Q15008 389 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 EDRF1Q3B7T1 1238 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 LIN9Q5TKA1 542 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 CRELD2Q6UXH1 353 aaPredicted RBP13.24□□□□□ -0.29
LTBR-204ENST00000444814 CYP26C1Q6V0L0 522 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 LRRC52Q8N7C0 313 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 GLIS3Q8NEA6 775 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 POP1Q99575 1024 aaKnown RBP13.24□□□□□ -0.29
LTBR-204ENST00000444814 PAAF1Q9BRP4 392 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 MAFFQ9ULX9 164 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 HCFC2Q9Y5Z7 792 aa13.24□□□□□ -0.29
LTBR-204ENST00000444814 CETN3O15182 167 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 STX10O60499 249 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 PHACTR2O75167 634 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 EFEMP2O95967 443 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 CNPP09543 421 aaKnown RBP13.23□□□□□ -0.29
LTBR-204ENST00000444814 ELF1P32519 619 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 YWHAHQ04917 246 aaPredicted RBP13.23□□□□□ -0.29
LTBR-204ENST00000444814 LRRC63Q05C16 580 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 ENPEPQ07075 957 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 TRPC3Q13507 836 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 C9orf57Q5W0N0 161 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 CEP135Q66GS9 1140 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 ANKRD54Q6NXT1 300 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 LLGL2Q6P1M3 1020 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 THEM5Q8N1Q8 247 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 SPATA20Q8TB22 786 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 RABGGTAQ92696 567 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 DHTKD1Q96HY7 919 aaPredicted RBP13.23□□□□□ -0.29
LTBR-204ENST00000444814 RIPOR3Q96MK2 946 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 NECTIN4Q96NY8 510 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 VN1R3Q9BXE9 311 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 KCTD10Q9H3F6 313 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 SFXN1Q9H9B4 322 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 PRDM16Q9HAZ2 1276 aa13.23□□□□□ -0.29
LTBR-204ENST00000444814 CITO14578 2027 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 TEX28O15482 410 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 LILRB3O75022 631 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 GADD45BO75293 160 aaPredicted RBP13.22□□□□□ -0.29
LTBR-204ENST00000444814 FGFR1OPO95684 399 aaKnown RBP13.22□□□□□ -0.29
LTBR-204ENST00000444814 MBD3O95983 291 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 KRT19P08727 400 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 DLATP10515 647 aaKnown RBP13.22□□□□□ -0.29
LTBR-204ENST00000444814 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
LTBR-204ENST00000444814 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
LTBR-204ENST00000444814 TYMPP19971 482 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 NR2F2P24468 414 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 HOXD13P35453 343 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 PSMC2P35998 433 aaKnown RBP13.22□□□□□ -0.29
LTBR-204ENST00000444814 CYP24A1Q07973 514 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 PTCRAQ6ISU1 281 aaPredicted RBP13.22□□□□□ -0.29
LTBR-204ENST00000444814 CCDC149Q6ZUS6 474 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 INTS8Q75QN2 995 aaKnown RBP13.22□□□□□ -0.29
LTBR-204ENST00000444814 CBWD2Q8IUF1 395 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 CSGALNACT2Q8N6G5 542 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 RDH13Q8NBN7 331 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 CCDC150Q8NCX0 1101 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 SPATA18Q8TC71 538 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 AUTS2Q8WXX7 1259 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 CGRRF1Q99675 332 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 DNAI2Q9GZS0 605 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 PDE11AQ9HCR9 933 aa13.22□□□□□ -0.29
LTBR-204ENST00000444814 INTS13Q9NVM9 706 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms