RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CACNG4Q9UBN1 327 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 RWDD2AQ9UIY3 292 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 PPP1R3GB7ZBB8 358 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 IKBKBO14920 756 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 MEFVO15553 781 aaPredicted RBP15.22■□□□□ 0.03
SSBP3-208ENST00000444533 ITGB3P05106 788 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 TAF6P49848 677 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 ENPEPQ07075 957 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 ADGRE1Q14246 886 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 CCDC40Q4G0X9 1142 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 C9orf57Q5W0N0 161 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.22■□□□□ 0.03
SSBP3-208ENST00000444533 EFCAB13Q8IY85 973 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 MAFAQ8NHW3 353 aaPredicted RBP15.22■□□□□ 0.03
SSBP3-208ENST00000444533 PPM1EQ8WY54 764 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 CDCA3Q99618 268 aaPredicted RBP15.22■□□□□ 0.03
SSBP3-208ENST00000444533 ZBP1Q9H171 429 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 TLE6Q9H808 572 aa15.22■□□□□ 0.03
SSBP3-208ENST00000444533 TRIM49BA6NDI0 452 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 C2CD2LO14523 706 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 SYN3O14994 580 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 AKAP3O75969 853 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 ODC1P11926 461 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
SSBP3-208ENST00000444533 BMP6P22004 513 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 DNAJB1P25685 340 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 POLR2BP30876 1174 aaKnown RBP15.21■□□□□ 0.03
SSBP3-208ENST00000444533 CASP4P49662 377 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 STX17P56962 302 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 ERVFC1P60507 584 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 BFSP1Q12934 665 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 CCDC85BQ15834 202 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-208ENST00000444533 STX1AQ16623 288 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 ANKS3Q6ZW76 656 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 PPFIBP1Q86W92 1011 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 METTL23Q86XA0 190 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 GPR65Q8IYL9 337 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 LRRC52Q8N7C0 313 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 MRPL43Q8N983 215 aaKnown RBP15.21■□□□□ 0.03
SSBP3-208ENST00000444533 CCDC150Q8NCX0 1101 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 PARD3BQ8TEW8 1205 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 BCL7CQ8WUZ0 217 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-208ENST00000444533 RIN2Q8WYP3 895 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-208ENST00000444533 GPR62Q9BZJ7 368 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 IMPG2Q9BZV3 1241 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 NAT10Q9H0A0 1025 aaKnown RBP15.21■□□□□ 0.03
SSBP3-208ENST00000444533 ARMCX3Q9UH62 379 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-208ENST00000444533 DPP7Q9UHL4 492 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 DSEQ9UL01 958 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 AGAP1Q9UPQ3 857 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 TRIP11Q15643 1979 aa15.21■□□□□ 0.03
SSBP3-208ENST00000444533 COL4A4P53420 1690 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-208ENST00000444533 ANO9A1A5B4 782 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 SPDYE4A6NLX3 237 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 H7C4K7 107 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 FSCN2O14926 492 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 ADH1AP07327 375 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 CCDC192P0DO97 292 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 KLRC2P26717 231 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 ERCC5P28715 1186 aaPredicted RBP15.2■□□□□ 0.02
SSBP3-208ENST00000444533 GUCY2FP51841 1108 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 DSG1Q02413 1049 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 TCEAL5Q5H9L2 206 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
SSBP3-208ENST00000444533 LMBRD2Q68DH5 695 aaPredicted RBP15.2■□□□□ 0.02
SSBP3-208ENST00000444533 TTI2Q6NXR4 508 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 RBM43Q6ZSC3 357 aaKnown RBP15.2■□□□□ 0.02
SSBP3-208ENST00000444533 EP400NLQ6ZTU2 488 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 FILIP1Q7Z7B0 1213 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 CREBRFQ8IUR6 639 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 FAM114A1Q8IWE2 563 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 C1orf127Q8N9H9 656 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 EEF2KMTQ96G04 330 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 SUSD3Q96L08 255 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 OXCT2Q9BYC2 517 aaPredicted RBP15.2■□□□□ 0.02
SSBP3-208ENST00000444533 MAGEC2Q9UBF1 373 aaPredicted RBP15.2■□□□□ 0.02
SSBP3-208ENST00000444533 IRAK3Q9Y616 596 aa15.2■□□□□ 0.02
SSBP3-208ENST00000444533 C2orf71A6NGG8 1288 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 KPNA7A9QM74 516 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 F8W810 466 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 PIRO00625 290 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 P4HA1P13674 534 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 GTF2H1P32780 548 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 IRS1P35568 1242 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 BRCC3P46736 316 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 NRIP1P48552 1158 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 PMS1P54277 932 aaKnown RBP15.19■□□□□ 0.02
SSBP3-208ENST00000444533 LILRA4P59901 499 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 CETN1Q12798 172 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 DPCR1Q3MIW9 517 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 TRAPPC11Q7Z392 1133 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 FRMD5Q7Z6J6 570 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 RBM23Q86U06 439 aaKnown RBP15.19■□□□□ 0.02
SSBP3-208ENST00000444533 OR5B17Q8NGF7 314 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 POP1Q99575 1024 aaKnown RBP15.19■□□□□ 0.02
SSBP3-208ENST00000444533 SRRTQ9BXP5 876 aaKnown RBP15.19■□□□□ 0.02
SSBP3-208ENST00000444533 IGFLR1Q9H665 355 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 CHST7Q9NS84 486 aa15.19■□□□□ 0.02
SSBP3-208ENST00000444533 PCDHB8Q9UN66 801 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms