RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 PEAR1Q5VY43 1037 aaPredicted RBP15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 NIPA1Q7RTP0 329 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 GLRX5Q86SX6 157 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 SPRYD3Q8NCJ5 442 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 ZNF461Q8TAF7 563 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 RLN3Q8WXF3 142 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 ACDQ96AP0 544 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 CHFRQ96EP1 664 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 ZNF512Q96ME7 567 aaPredicted RBP15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 FNBP1Q96RU3 617 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 KIF2CQ99661 725 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 TRIM4Q9C037 500 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 CAPN10Q9HC96 672 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 FBRSL1Q9HCM7 1045 aaKnown RBP15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 ASAH2Q9NR71 780 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 TBC1D22BQ9NU19 505 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 SALL3Q9BXA9 1300 aa15.84■□□□□ 0.13
SYNCRIP-203ENST00000444272 CREBBPQ92793 2442 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 ARHGAP33O14559 1287 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 GP1BBP13224 206 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 IL12RB1P42701 662 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 CCR10P46092 362 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 PLCB2Q00722 1185 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 TUSC3Q13454 348 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 LY6DQ14210 128 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 STXBP5Q5T5C0 1151 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 PRICKLE2Q7Z3G6 844 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 RASSF3Q86WH2 238 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 GALNT15Q8N3T1 639 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 CEP76Q8TAP6 659 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 CNOT6LQ96LI5 555 aaKnown RBP15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 CEP89Q96ST8 783 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 CEP72Q9P209 647 aa15.83■□□□□ 0.12
SYNCRIP-203ENST00000444272 A0A1W2PRU2 124 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 SEC24AO95486 1093 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 PRKCBP05771 671 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 MX1P20591 662 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 DRD1P21728 446 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 FGFR3P22607 806 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 U2AF2P26368 475 aaKnown RBP eCLIP15.82■□□□□ 0.129e-7■■■□□ 16.7
SYNCRIP-203ENST00000444272 EPHA5P54756 1037 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 PSMD2Q13200 908 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 IMMTQ16891 758 aaKnown RBP15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 SRGAP1Q7Z6B7 1085 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 TTC30AQ86WT1 665 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 FRMD1Q8N878 549 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 LEMD2Q8NC56 503 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 MDGA1Q8NFP4 955 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 CPB2Q96IY4 423 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 TRIM6Q9C030 488 aaPredicted RBP15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 COL4A3BPQ9Y5P4 624 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 BACE2Q9Y5Z0 518 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 FBN2P35556 2912 aa15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 HELZP42694 1942 aaKnown RBP15.82■□□□□ 0.12
SYNCRIP-203ENST00000444272 IGLV3-22A0A075B6J6 115 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 hCG_1642624A0A1W2PR95 340 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 WDR64B1ANS9 1081 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 CBFA2T3O75081 653 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 GJB3O75712 270 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 ERLIN2O94905 339 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 ABLIM3O94929 683 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 SRGAP2CP0DJJ0 459 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 ATF2P15336 505 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 HOXD12P35452 270 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 SREBF1P36956 1147 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 ARPP19P56211 112 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 FBXO43Q4G163 708 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 TCEAL8Q8IYN2 117 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 HACE1Q8IYU2 909 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 CEP192Q8TEP8 1941 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 WBP1Q96G27 269 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 TOR4AQ9NXH8 423 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 PCOLCE2Q9UKZ9 415 aa15.81■□□□□ 0.12
SYNCRIP-203ENST00000444272 ARID2Q68CP9 1835 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 IFIT3O14879 490 aaKnown RBP15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 MAFO75444 373 aaPredicted RBP15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 SYPP08247 313 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 KRT10P13645 584 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 HLA-EP13747 358 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 TKTP29401 623 aaKnown RBP15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 GALK1P51570 392 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 TWF1Q12792 350 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 NAIF1Q69YI7 327 aaPredicted RBP15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 NOTUMQ6P988 496 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 CATIPQ7Z7H3 387 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 CMTR1Q8N1G2 835 aaKnown RBP15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 BPIFB1Q8TDL5 484 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 DDX27Q96GQ7 796 aaKnown RBP15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 SPACA7Q96KW9 195 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 CSRNP2Q9H175 543 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 DCTPP1Q9H773 170 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 DISC1Q9NRI5 854 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 PARP2Q9UGN5 583 aa15.8■□□□□ 0.12
SYNCRIP-203ENST00000444272 OTOL1A6NHN0 477 aaPredicted RBP15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 GOLGA8CPA6NN73 597 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 PLK4O00444 970 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 PLEKHA8P1O95397 391 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 ATXN1LP0C7T5 689 aaKnown RBP15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 P2RY2P41231 377 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 MFAP1P55081 439 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms