RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 TNNI1P19237 187 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 LRPAP1P30533 357 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 POLR2BP30876 1174 aaKnown RBP13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 ARPP19P56211 112 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 SNRPFP62306 86 aaKnown RBP13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 CREMQ03060 361 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 BFSP1Q12934 665 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 ADAM15Q13444 863 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 ZNF658Q5TYW1 1059 aaPredicted RBP13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 KIAA0319Q5VV43 1072 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 C9orf57Q5W0N0 161 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 KLHL10Q6JEL2 608 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 SPATA31D4Q6ZUB0 917 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 CASP10Q92851 521 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 KCTD10Q9H3F6 313 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 CD207Q9UJ71 328 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 FRMD4BQ9Y2L6 1034 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 C2CD2Q9Y426 696 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 TIMM13Q9Y5L4 95 aaPredicted RBP13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 HCFC2Q9Y5Z7 792 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 UNC80Q8N2C7 3258 aa13.2□□□□□ -0.3
SLC48A1-202ENST00000442892 TSC2P49815 1807 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 PDXKO00764 312 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 GLUD1P00367 558 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 NR2F2P24468 414 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 PRCPP42785 496 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 CYP24A1Q07973 514 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 STIM1Q13586 685 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 SURF1Q15526 300 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 ZBTB6Q15916 424 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 PTCRAQ6ISU1 281 aaPredicted RBP13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 CD300LGQ6UXG3 332 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 USP37Q86T82 979 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 PPFIBP1Q86W92 1011 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 RNF168Q8IYW5 571 aaPredicted RBP13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 GUF1Q8N442 669 aaKnown RBP13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 ATXN2LQ8WWM7 1075 aaKnown RBP13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 ZNF560Q96MR9 790 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 TSPAN18Q96SJ8 248 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 TSG101Q99816 390 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 CHST7Q9NS84 486 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 AGAP1Q9UPQ3 857 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 IRAK3Q9Y616 596 aa13.19□□□□□ -0.3
SLC48A1-202ENST00000442892 PTPRJQ12913 1337 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 FGFR3P22607 806 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 LTBRP36941 435 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 CASP4P49662 377 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 TAF6P49848 677 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 CLCN4P51793 760 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 POU5F1Q01860 360 aaKnown RBP13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 CTC1Q2NKJ3 1217 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 CTXN3Q4LDR2 81 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 VARS2Q5ST30 1063 aaKnown RBP13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 PDXDC1Q6P996 788 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 ANKS3Q6ZW76 656 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 NT5DC4Q86YG4 428 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 C12orf56Q8IXR9 622 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 C12orf76Q8N812 135 aaPredicted RBP13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 C1orf127Q8N9H9 656 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 APPL2Q8NEU8 664 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 OR5B17Q8NGF7 314 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 EEF2KMTQ96G04 330 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 SUSD3Q96L08 255 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 ASB2Q96Q27 587 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 CGRRF1Q99675 332 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 MMRN2Q9H8L6 949 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 MAN1C1Q9NR34 630 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 LMBRD1Q9NUN5 540 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 CDY1Q9Y6F8 540 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 C2orf16Q68DN1 1984 aa13.18□□□□□ -0.3
SLC48A1-202ENST00000442892 XIRP2A4UGR9 3374 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 H7C4K7 107 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 PSMA7O14818 248 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 LILRB3O75022 631 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 PHACTR2O75167 634 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 EFEMP2O95967 443 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 WEE2P0C1S8 567 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 ODC1P11926 461 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 RPL13P26373 211 aaKnown RBP13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 OR1D2P34982 312 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 LILRA4P59901 499 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 ADAM9Q13443 819 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 BIRC3Q13489 604 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 PSMD6Q15008 389 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 LEXMQ3ZCV2 418 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 SV2CQ496J9 727 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 TJAP1Q5JTD0 557 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 ZNF280DQ6N043 979 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms