RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 RIN2Q8WYP3 895 aaPredicted RBP13.33□□□□□ -0.28
USP1-203ENST00000442679 ANKRD36BP1Q96IX9 119 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 FAM84AQ96KN4 292 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 POP1Q99575 1024 aaKnown RBP13.33□□□□□ -0.28
USP1-203ENST00000442679 CGRRF1Q99675 332 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 TTPALQ9BTX7 342 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 IRAK3Q9Y616 596 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.28
USP1-203ENST00000442679 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 MAPK13O15264 365 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 NCK2O43639 380 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 AKAP3O75969 853 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 ITGB3P05106 788 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 FGFR3P22607 806 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 GTF2F1P35269 517 aaKnown RBP eCLIP13.32□□□□□ -0.28
USP1-203ENST00000442679 PSMC2P35998 433 aaKnown RBP13.32□□□□□ -0.28
USP1-203ENST00000442679 PMS1P54277 932 aaKnown RBP13.32□□□□□ -0.28
USP1-203ENST00000442679 LILRA4P59901 499 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 FKBP3Q00688 224 aaKnown RBP13.32□□□□□ -0.28
USP1-203ENST00000442679 LRRC63Q05C16 580 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 DUSP6Q16828 381 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 RTP2Q5QGT7 225 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.32□□□□□ -0.28
USP1-203ENST00000442679 FAM186BQ8IYM0 893 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 CSGALNACT2Q8N6G5 542 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 C1orf127Q8N9H9 656 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 PLEKHO2Q8TD55 490 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 PARD3BQ8TEW8 1205 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 EEF2KMTQ96G04 330 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 SUSD3Q96L08 255 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 CDCA3Q99618 268 aaPredicted RBP13.32□□□□□ -0.28
USP1-203ENST00000442679 EMILIN2Q9BXX0 1053 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 GZF1Q9H116 711 aaPredicted RBP13.32□□□□□ -0.28
USP1-203ENST00000442679 ITGA11Q9UKX5 1188 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 AGAP1Q9UPQ3 857 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 PTPRJQ12913 1337 aa13.32□□□□□ -0.28
USP1-203ENST00000442679 CLASP2O75122 1294 aaKnown RBP13.31□□□□□ -0.28
USP1-203ENST00000442679 KRT19P08727 400 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 CNPP09543 421 aaKnown RBP13.31□□□□□ -0.28
USP1-203ENST00000442679 PAX3P23760 479 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 KLRC2P26717 231 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 TKTP29401 623 aaKnown RBP13.31□□□□□ -0.28
USP1-203ENST00000442679 POLR2BP30876 1174 aaKnown RBP13.31□□□□□ -0.28
USP1-203ENST00000442679 RBP5P82980 135 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 ADAM15Q13444 863 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 PDXDC1Q6P996 788 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 PRSS55Q6UWB4 352 aaPredicted RBP13.31□□□□□ -0.28
USP1-203ENST00000442679 DSTYKQ6XUX3 929 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 EP400NLQ6ZTU2 488 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 TRAPPC11Q7Z392 1133 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 GPR65Q8IYL9 337 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 EFHBQ8N7U6 833 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 MLKLQ8NB16 471 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 ZNF516Q92618 1163 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 KLHL5Q96PQ7 755 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 RXFP1Q9HBX9 757 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.31□□□□□ -0.28
USP1-203ENST00000442679 CTNND2Q9UQB3 1225 aa13.31□□□□□ -0.28
USP1-203ENST00000442679 R3HCC1Q9Y3T6 440 aaKnown RBP13.31□□□□□ -0.28
USP1-203ENST00000442679 CITO14578 2027 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 REV3LO60673 3130 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 BICDL2A1A5D9 508 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 LRRIQ3A6PVS8 624 aaPredicted RBP13.3□□□□□ -0.28
USP1-203ENST00000442679 M0QZQ0 153 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 SYN3O14994 580 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 SPTLC1O15269 473 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 LINC01565O15544 149 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 EPB41P11171 864 aaKnown RBP13.3□□□□□ -0.28
USP1-203ENST00000442679 KRT13P13646 458 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 PNPLA4P41247 253 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
USP1-203ENST00000442679 TAF6P49848 677 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 VAMP7P51809 220 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 STX17P56962 302 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 NLRP12P59046 1061 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 DLG4P78352 724 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 CLDN10P78369 228 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 CREMQ03060 361 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 PAK1Q13153 545 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 PSMD5Q16401 504 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 CCDC183Q5T5S1 534 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 SCARA3Q6AZY7 606 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 TTI2Q6NXR4 508 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 INTS8Q75QN2 995 aaKnown RBP13.3□□□□□ -0.28
USP1-203ENST00000442679 USP37Q86T82 979 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 ZC3H3Q8IXZ2 948 aaKnown RBP13.3□□□□□ -0.28
USP1-203ENST00000442679 APPL2Q8NEU8 664 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 CXorf38Q8TB03 319 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 LNX1Q8TBB1 728 aaPredicted RBP13.3□□□□□ -0.28
USP1-203ENST00000442679 PIK3R5Q8WYR1 880 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 HLA-CQ95604 372 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 PABPC5Q96DU9 382 aaKnown RBP13.3□□□□□ -0.28
USP1-203ENST00000442679 DUSP9Q99956 384 aaKnown RBP13.3□□□□□ -0.28
USP1-203ENST00000442679 MKNK1Q9BUB5 465 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 PRDM6Q9NQX0 595 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 CLDND1Q9NY35 253 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 FNIP2Q9P278 1114 aa13.3□□□□□ -0.28
USP1-203ENST00000442679 SIX4Q9UIU6 781 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms