RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RTP2Q5QGT7 225 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 C9orf57Q5W0N0 161 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 ANKS3Q6ZW76 656 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 LNX1Q8TBB1 728 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 NOC3LQ8WTT2 800 aaKnown RBP16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 SLC22A17Q8WUG5 538 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 MFSD14AQ96MC6 490 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 ASB2Q96Q27 587 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 PDE11AQ9HCR9 933 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 DPP7Q9UHL4 492 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 HCFC2Q9Y5Z7 792 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 ARHGEF37A1IGU5 675 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 GOLGA6L22H0YM25 854 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 M0QZQ0 153 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 MAPK13O15264 365 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 TEX28O15482 410 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 NR3C1P04150 777 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 IGFBP6P24592 240 aaPredicted RBP16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 KLRC2P26717 231 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 CLCN4P51793 760 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 WNT7BP56706 349 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 TFAMQ00059 246 aaKnown RBP16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 TFF2Q03403 129 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 DLX2Q07687 328 aaPredicted RBP16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 CYP24A1Q07973 514 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 PSMD6Q15008 389 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 PSMD5Q16401 504 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 EDRF1Q3B7T1 1238 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 EP400NLQ6ZTU2 488 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 CEP57Q86XR8 500 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 WDR49Q8IV35 697 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 APPL2Q8NEU8 664 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 VN1R2Q8NFZ6 395 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 HDAC7Q8WUI4 952 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 ANKRD36BP1Q96IX9 119 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 MSLNLQ96KJ4 702 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 B3GALT6Q96L58 329 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 LMBRD1Q9NUN5 540 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 INTS13Q9NVM9 706 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 DZANK1Q9NVP4 752 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 CLEC1BQ9P126 229 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 ITGA11Q9UKX5 1188 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 PCDHB8Q9UN66 801 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 BACE2Q9Y5Z0 518 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 TSC2P49815 1807 aa16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 TCF20Q9UGU0 1960 aaKnown RBP16.26■□□□□ 0.19
CSNK1E-210ENST00000442216 TMEM191BP0C7N4 346 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 RPL13P26373 211 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 TKTP29401 623 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 PNPLA4P41247 253 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 PRCPP42785 496 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 GUCY2FP51841 1108 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 LILRA4P59901 499 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 MRPL58Q14197 206 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 ZCWPW2Q504Y3 356 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 TJAP1Q5JTD0 557 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 ANKRD54Q6NXT1 300 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 ELMSAN1Q6PJG2 1045 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 RDH13Q8NBN7 331 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 ERCC4Q92889 916 aaPredicted RBP16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 ZNF560Q96MR9 790 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 FNBP1Q96RU3 617 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 OXCT2Q9BYC2 517 aaPredicted RBP16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 MTRRQ9UBK8 725 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 CD207Q9UJ71 328 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 MAN1B1Q9UKM7 699 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 MAPK8IP1Q9UQF2 711 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 FAM50BQ9Y247 325 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 EYSQ5T1H1 3165 aa16.25■□□□□ 0.19
CSNK1E-210ENST00000442216 H7C4K7 107 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 GLUD1P00367 558 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 TNNC2P02585 160 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 TYMPP19971 482 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 TAF6P49848 677 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 AP3M2P53677 418 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 ENPEPQ07075 957 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 STIM1Q13586 685 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 CENPPQ6IPU0 288 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 PRSS55Q6UWB4 352 aaPredicted RBP16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 SMYD4Q8IYR2 804 aaPredicted RBP16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 ADSSL1Q8N142 457 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 LRRC52Q8N7C0 313 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 C1orf127Q8N9H9 656 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 TRIML1Q8N9V2 468 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 SMRP1Q8NCR6 262 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 CGRRF1Q99675 332 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 CLSTN3Q9BQT9 956 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 BARX2Q9UMQ3 279 aaPredicted RBP16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 FRMD4BQ9Y2L6 1034 aa16.24■□□□□ 0.19
CSNK1E-210ENST00000442216 H3BQ06 376 aaPredicted RBP16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 I3L4J1 428 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 PPEF2O14830 753 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 TBC1D4O60343 1298 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 BMP1P13497 986 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 NR2F2P24468 414 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 CLDN10P78369 228 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 RBP5P82980 135 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 SMAD4Q13485 552 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms