RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 PI4K2AQ9BTU6 479 aa17.09■□□□□ 0.33
MCF2L-217ENST00000441756 FAM124BQ9H5Z6 455 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-217ENST00000441756 KANSL3Q9P2N6 904 aa17.09■□□□□ 0.33
MCF2L-217ENST00000441756 SIX4Q9UIU6 781 aa17.09■□□□□ 0.33
MCF2L-217ENST00000441756 AGAP1Q9UPQ3 857 aa17.09■□□□□ 0.33
MCF2L-217ENST00000441756 PCDHB7Q9Y5E2 793 aa17.09■□□□□ 0.33
MCF2L-217ENST00000441756 BZW2Q9Y6E2 419 aaKnown RBP17.09■□□□□ 0.33
MCF2L-217ENST00000441756 KIAA0100Q14667 2235 aaKnown RBP17.09■□□□□ 0.33
MCF2L-217ENST00000441756 ENPP3O14638 875 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 PTGESO14684 152 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 ARHGAP6O43182 974 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 SKILP12757 684 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 IBSPP21815 317 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-217ENST00000441756 PAX3P23760 479 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 SOX5P35711 763 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 GOLGA8FQ08AF8 430 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 GOLGA8DPQ0D2H9 430 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 CUL2Q13617 745 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 MEA1Q16626 185 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 ARHGAP44Q17R89 818 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 GJB7Q6PEY0 223 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 RTN4RL1Q86UN2 441 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-217ENST00000441756 NPAS4Q8IUM7 802 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 ABI1Q8IZP0 508 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 HELQQ8TDG4 1101 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 HPDLQ96IR7 371 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 FAM84AQ96KN4 292 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 ZFP42Q96MM3 310 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 UROC1Q96N76 676 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 AIPL1Q9NZN9 384 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 TUBGCP4Q9UGJ1 667 aa17.08■□□□□ 0.32
MCF2L-217ENST00000441756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.08■□□□□ 0.32
MCF2L-217ENST00000441756 ABHD14A-ACY1A0A1B0GW23 586 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 TRIM43BA6NCK2 446 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 RNF225M0QZC1 329 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-217ENST00000441756 CST3P01034 146 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-217ENST00000441756 SERPING1P05155 500 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 LRPAP1P30533 357 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 SCNN1GP51170 649 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 TNNC1P63316 161 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 CCZ1BP86790 482 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 CCZ1P86791 482 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-217ENST00000441756 SV2CQ496J9 727 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 TDRD12Q587J7 1177 aaKnown RBP17.07■□□□□ 0.32
MCF2L-217ENST00000441756 C9orf57Q5W0N0 161 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 SHC3Q92529 594 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 TRIM43Q96BQ3 446 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-217ENST00000441756 XYLT2Q9H1B5 865 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 CENPFP49454 3210 aa17.07■□□□□ 0.32
MCF2L-217ENST00000441756 ANO9A1A5B4 782 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
MCF2L-217ENST00000441756 ANXA13P27216 316 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 RPL9P32969 192 aaKnown RBP17.06■□□□□ 0.32
MCF2L-217ENST00000441756 CYLC1P35663 651 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-217ENST00000441756 KCNJ6P48051 423 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.325e-20■■□□□ 11.9
MCF2L-217ENST00000441756 NOMO2Q5JPE7 1267 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 VPS36Q86VN1 386 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 CCDC170Q8IYT3 715 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 CXorf38Q8TB03 319 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 TATDN2Q93075 761 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 C18orf25Q96B23 403 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-217ENST00000441756 DDX27Q96GQ7 796 aaKnown RBP17.06■□□□□ 0.32
MCF2L-217ENST00000441756 MRPL9Q9BYD2 267 aaKnown RBP17.06■□□□□ 0.32
MCF2L-217ENST00000441756 DNAI2Q9GZS0 605 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 KCNF1Q9H3M0 494 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 CYP3A43Q9HB55 503 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.06■□□□□ 0.32
MCF2L-217ENST00000441756 INPP5FQ9Y2H2 1132 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 NUB1Q9Y5A7 615 aa17.06■□□□□ 0.32
MCF2L-217ENST00000441756 SCN5AQ14524 2016 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 SSU72P8A0A1W2PR75 194 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 MEIS3P2A8K0S8 358 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 LRRN2O75325 713 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 OFD1O75665 1012 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 BAIAP3O94812 1187 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 PRKCIP41743 596 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 TAF6P49848 677 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 GUCY2FP51841 1108 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 BPIFB4P59827 614 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 KLHL30Q0D2K2 578 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 TUSC3Q13454 348 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 WDR72Q3MJ13 1102 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 SPOPLQ6IQ16 392 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 TMEM139Q8IV31 216 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 KREMEN1Q96MU8 473 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 DEF6Q9H4E7 631 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 APOBEC3GQ9HC16 384 aaKnown RBP17.05■□□□□ 0.32
MCF2L-217ENST00000441756 NXF1Q9UBU9 619 aaKnown RBP17.05■□□□□ 0.32
MCF2L-217ENST00000441756 AJAP1Q9UKB5 411 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-217ENST00000441756 ZKSCAN5Q9Y2L8 839 aa17.05■□□□□ 0.32
MCF2L-217ENST00000441756 PIRO00625 290 aa17.04■□□□□ 0.32
MCF2L-217ENST00000441756 EVI5O60447 810 aa17.04■□□□□ 0.32
MCF2L-217ENST00000441756 GFPT2O94808 682 aa17.04■□□□□ 0.32
MCF2L-217ENST00000441756 AMHP03971 560 aa17.04■□□□□ 0.32
MCF2L-217ENST00000441756 KRT5P13647 590 aa17.04■□□□□ 0.32
MCF2L-217ENST00000441756 CSF2RAP15509 400 aa17.04■□□□□ 0.32
MCF2L-217ENST00000441756 USP8P40818 1118 aa17.04■□□□□ 0.32
MCF2L-217ENST00000441756 ARID5AQ03989 594 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms